Salmo salar (Atlantic salmon): 106586756
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Entry
106586756 CDS
T04363
Name
(RefSeq) POU domain, class 2, transcription factor 1-like
KO
K09364
POU domain transcription factor, class 2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106586756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106586756
03021 Transcription machinery [BR:
sasa03021
]
106586756
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
106586756
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
106586756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
DUF3839
T6_Ig_like
Motif
Other DBs
NCBI-GeneID:
106586756
NCBI-ProteinID:
XP_014029816
UniProt:
A0A1S3PQB3
LinkDB
All DBs
Position
ssa25:complement(39744684..39775560)
Genome browser
AA seq
758 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNASETSKCGMESQSGDGNTEIQTNGLDFQRQTVQTTSAIT
NAHTQALLQQSKSEDSGAIPTSVQQGVLPQAQLMLAGGQIAGLTLSPAQQQMLLQQAQAQ
LLAAAMQQQSASQQSSTTGASISASAATPITQLPLSQPIQITSIPSGSTHLPGQLSQLGY
PYEMATFSSYLPQLQQLQQQNLTMPQFVLVQPGHHIATQLQPGQFIISQSPQGQQSLLQG
QSLLTQLPQSQANLLQTHPSITLATQPATPTRTIAATPIQPLSHSQTSPPKRLATPSLEE
PSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCK
LKPLLEKWLNDAVYADNLSSDQALSSPSALGSPGLGMEGLNRRRKKRTSIETNIRLALEK
RFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSGGYSNTGTGSSPIK
TIFTPTIPLVASTASLVTSNTPTTLTVNPVMPLSSSSVSGLTFTGTTIGATTNTASVIST
APMVTAVTSSPSLSPSPTALQATAAETGGTQEHTVVTQAPSSLATTLGTGQVMVAGLGLS
AALQGAAQLPTSTSFAAMAGLNQGLMASSQFTPGGALLSLAPGGLGGALNPAMLSNSTLA
TIQGLWSALASGGALPITSLDGSGNLLFANTSAGSTPNLMQPLFLNPQNLSLLTTNPVNL
VSAGAAGGGALQVSADHQVTTATVPVPASTITTASRAQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatgcgtcggaaacgagtaaatgtggaatggagagtcagagtggggacggaaacacagaa
atccaaacgaatggactggactttcagaggcagacggttcagaccacaagcgcaatcacc
aacgcacacacacaggctctcctccaacagtccaagtcagaagactcgggtgcaattcca
acctccgtccagcagggcgtgctgcctcaggcccagctcatgctggctgggggacagata
gctggattgaccctgtctccagcgcagcagcagatgttgttgcagcaggcccaggcccag
ctcctagcagcagccatgcagcagcagtcagccagccagcagagcagcactacgggggca
agcatctctgcctctgcagccacccctatcacacaactgcccctgtcccagcccatccag
atcacctctattccctctggttctacccatcttccaggccagctaagccagctgggatac
ccctatgagatggcgaccttcagcagttacctacctcagttacaacagctacagcagcag
aacctgaccatgccccagtttgtcctggttcagcccggccaccacatcgctacccagctg
cagcctggccagttcatcatctcacagtcgccgcagggccagcagagtctcctgcaaggc
cagagtcttctaactcaactacctcaaagccaagccaacctcctgcagacgcatcccagc
atcacgctcgccacacagccagcgactccgacccgtacgatagcagccacgcccatccag
cctctgtcccacagccagacctcgccccctaaacgcctggccacgcccagtctggaggag
cccagtgacctggaggagctggaacagtttgccaagaccttcaaacagagacgcatcaaa
ctgggcttcacacagggagatgttggcctggccatgggcaagctgtacggtaacgacttc
agccagaccaccatctcccgcttcgaggccttgaacctcagctttaagaacatgtgcaag
ctgaagccactgctggagaagtggctcaacgatgcagtttatgcagacaacctgtcgtct
gaccaggccctgtccagccccagcgccctgggctcccctggcctgggtatggaggggctg
aaccgccgacgcaagaagaggaccagcatcgagaccaacatccgcttggccttagaaaag
agatttctggaacagaaccaaaaacctacctctgaggagatcaccatgatcgccgaccag
ctcaacatggagaaggaggtgatccgggtttggttctgtaaccgccggcagaaagagaag
aggatcaacccccccagcggtggatacagcaacacagggacaggcagcagccccatcaaa
accatcttcacccctacgatccccctggtggccagtacggccagccttgtgaccagtaac
acaccgactacactgactgtaaacccagtgatgcctctcagcagcagcagcgtgtctggc
ctgaccttcacaggcacgaccataggagcgaccacaaacacggcatccgtcatctccacg
gcacccatggttactgcggtgaccagctccccatcgctaagcccctcccccacggccctc
caggccacggcggcggagacgggcggaacccaggagcacacggtggtcacgcaggcaccg
tcgtccctagcgaccactctggggacgggtcaggtgatggtggctggactgggcctgtcg
gccgccctgcaaggcgccgcccagttacccaccagcactagtttcgctgccatggccggg
cttaaccaaggacttatggcgtcatcgcagttcactcctgggggggccttgctgagcttg
gctccaggggggctgggaggggctctgaaccccgccatgttgagcaacagcaccctagcc
accatccaaggtctgtggagcgccctggcatcaggcggcgctctccccatcacctcgctg
gacgggagcggtaacctgctgttcgccaatacctctgctggcagcacccccaacctgatg
caacccctcttcctgaacccccagaacctgtccctgctcaccaccaaccctgtcaacctg
gtgtcagccggagctgctgggggaggggccctgcaggtctcagctgaccaccaggtcacc
acggcgactgtaccagttcccgcctccaccatcaccactgcctccagggcccagtga
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