Salmo salar (Atlantic salmon): 106608231
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Entry
106608231 CDS
T04363
Name
(RefSeq) poly(A) polymerase beta-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106608231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106608231
Enzymes [BR:
sasa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
106608231
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
106608231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Polbeta
DUF6431
Motif
Other DBs
NCBI-GeneID:
106608231
NCBI-ProteinID:
XP_014061542
UniProt:
A0A1S3SB29
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Position
ssa06:complement(78448207..78479939)
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AA seq
771 aa
AA seq
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MALPTANQVSLGRETPKHYGITSPISLVQAKEADLVLTQRLTEALKPYGVFEEELELQRR
IHVLGKLNTLVKEWIRDVSETKNLPASVIETVGGKIFTFGSYRLGVHTKGADIDALFVAP
RHVERTDFFSSFLDKLKEQEEVKDLRAVEEAFVPVIKLSFDSIEIDILFARLALQTIPKN
LDLRDDGLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRTIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSVSTRAVMVDEFKQGLSITDEILQNKAEWSKL
FEAPNFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PGPKESREKEEVSTMWVIGVIFKKMEASENLNVDLTIDIQSFTDTVYRQAISSKMFEADM
KIQAMHVKKRQLHQLLPSLVMPKRRKHSTEGLRQMNDSSLDLSLDSDNSMSVPSPTALSA
AVPTLTPVKSGPLGPPPSPIAAAASQPEVQASTMSPPAVKRPGSPMQEERKRLKSDSEES
AAERQTSGDPVPSSQNPTPPPCMGPPGAPQTPSPPATMGLPAAPQTPSPPTTMGPPVAPQ
SPSPPPTMGPPVANKTPNQEVLEEKSPKEHQMEDPSIVPETKTTEDRGAASAGEGEVNED
SISEEMAASEGEVKMEADIKRVVSTDLSDVPLLPANPIPVVKNSIKLRLSR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcccttccaactgctaaccaggtgtcgttgggtcgggagactcccaagcactatggg
atcacttctcctatcagcctggtccaagctaaggaggctgaccttgtcctcacacaaagg
ctgactgaggccctgaaaccgtacggggtgtttgaagaggagctggaacttcaacgcaga
atacatgtgttgggaaaactcaacacactggtaaaggaatggatccgtgacgtcagtgag
acaaagaatctgcctgcctcggtgattgagactgttggagggaagatattcacatttggg
tcgtacaggttaggagttcacactaaaggggcagacattgacgccctctttgtggctcct
cggcatgtggagagaacagacttcttctcctcgttcctggacaagctgaaggagcaggag
gaagtcaaggatttgagggctgttgaggaggcatttgtcccggtgataaagctgtctttc
gacagcattgagatcgacatcctgtttgctcggttagcattgcaaaccatcccaaagaat
ctggaccttcgagatgatgggctgttgaagaaccttgacatccgctgcattaggagtctc
aatggttgcagagttacagatgagatccttcatcttgtacccaacattgagaacttcaga
ttgactctgaggaccatcaagctgtgggctaaacgccataacatctacagtaatatcctg
ggcttcctgggtggtgtatcctgggccatgctggtagccaggacctgccagctctacccc
aacgccgtggcctccaccctcgtacacaagtttttcctcgtcttctctaagtgggaatgg
cccaaccctgttctcttgaagcagccagaggactgcaacctgaacctgccagtgtgggac
cccagggtgacacccagtgacaggtatcacctgatgcccatcatcacaccagcctatccc
cagcagaactccacctacaacgtctccgtctccacacgggctgtcatggtggacgagttc
aaacagggtctgtccatcacagatgaaattttgcagaataaagcagagtggtccaaacta
tttgaagcaccaaacttctttcagaaatacaagcattatattgtgttgctagcgagcgcc
cccaccgagaagcagcacctggaatgggttggtctggttgagtctaagatcaggatcctt
gtggggaacctggagaagaatgagttcataacgctggcccatgtcaacccccagtccttc
cctggacccaaggaaagcagggagaaagaggaggtcagcaccatgtgggtgataggagtt
atctttaagaagatggaggcatcagagaacctcaatgttgacctaaccattgacatccag
tcctttactgacacagtgtaccgccaggcgatcagcagtaagatgtttgaggcagacatg
aagatccaggccatgcatgtgaagaagagacaactgcatcagctactgcccagcctggtc
atgcccaaacgcaggaagcactctacagaggggcttcgtcagatgaatgacagtagtctg
gacctatcgctggacagtgacaacagcatgtcagtgccctcccccacagccttgtcagcc
gcagtgcccacgttgaccccagtgaagagtggcccactaggtccccctcccagtcccatc
gcggcagcagccagccaaccagaggtccaagcttccactatgagtccgccagctgtgaag
agacctggttcccctatgcaagaagagaggaagaggttaaaatcagactcagaggagtca
gccgctgagagacagacctcaggagaccccgtccccagcagccagaaccccactcctcct
ccctgcatgggtcccccaggggccccccaaaccccctctcctcccgccaccatgggtctc
ccagcggccccccaaaccccctctcctcccaccaccatgggtcccccagtggccccccag
agcccatctcctccccccaccatgggtcccccagtggccaacaagacccctaaccaggag
gtgctggaggagaagagccctaaggagcaccagatggaggacccctccatagtcccagag
acaaagacaacagaggatagaggtgcagctagcgcaggagagggagaggtgaatgaggac
agtatatctgaggagatggctgcttctgaaggggaagtgaagatggaggcagacattaag
agagtggtgagtacggatctgtctgacgtgcctctcttgccagccaaccccattccagtg
gtgaagaactctatcaagcttcgtctcagcaggtag
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