KEGG   Salmo salar (Atlantic salmon): 106608684
Entry
106608684         CDS       T04363                                 

Definition
(RefSeq) putative transcription factor p65 homolog
  KO
K04735  transcription factor p65
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa04010  MAPK signaling pathway
sasa04137  Mitophagy - animal
sasa04210  Apoptosis
sasa04218  Cellular senescence
sasa04620  Toll-like receptor signaling pathway
sasa04621  NOD-like receptor signaling pathway
sasa04622  RIG-I-like receptor signaling pathway
sasa04623  Cytosolic DNA-sensing pathway
sasa04625  C-type lectin receptor signaling pathway
sasa04920  Adipocytokine signaling pathway
sasa05132  Salmonella infection
sasa05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    106608684
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    106608684
  09143 Cell growth and death
   04210 Apoptosis
    106608684
   04218 Cellular senescence
    106608684
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    106608684
   04621 NOD-like receptor signaling pathway
    106608684
   04622 RIG-I-like receptor signaling pathway
    106608684
   04623 Cytosolic DNA-sensing pathway
    106608684
   04625 C-type lectin receptor signaling pathway
    106608684
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    106608684
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    106608684
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    106608684
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sasa03000]
    106608684
Transcription factors [BR:sasa03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    106608684
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer PBP_N
Other DBs
NCBI-GeneID: 106608684
NCBI-ProteinID: XP_014062259
UniProt: A0A1S3SD45
LinkDB
Position
ssa07
AA seq 591 aa
MDGMYGWGQPPLNQGNSFIEIIEQPKPRGMRFRYKCEGRSAGSIPGEKSNDTTKTHPAIK
VHNYNGPLRVRVSLVTKNPPHKPHPHELVGKDCKHGYYEADLQERRVHSFQNLGIQCVKK
KDVNEAVSCRLQTQNNPFNIPEAKVWEEEFDLNAVRLCFQASITLPTGELHPLEPVVSQP
IYDNRAPNTAELKICRVNRNSGSCRGGDEIFLLCDKVQKEDIEVRFFQDSWEGKGTFSQA
DVHRQVAIVFRTPPFYDTNLTEPIRVKMQLRRPSDREVSEPMDFQFLPSDPDEYRLIEKR
KRTEGMFQNLKLGSISVAMPAERPFNTARRTVAAKPVASQPVNPVAPPRATSVKPQPYYD
SPQPGQLFQTQPKAEPSSSTPAETWKFLNSLTLDSQHKATPVARFTTNPQASAATSQAFP
TVNLSDLHGFTFSTFASPQEPVSAAATPEPTSTFGVQDSQFRVDGPMVDEELPEFPSFSE
VHQSGTLDSINIDDFQAMLVQSGLAGEGPGNSRVSVSQAPCHLPATNPVVNNSCGGSTWM
NYPNSIVNLLQSEGMVDSSPGNSSQPAVLDDLDVFSSIDEDRLMSILNSGN
NT seq 1776 nt   +upstreamnt  +downstreamnt
atggatggaatgtatggatggggacagccccctttgaaccaagggaattctttcatagag
atcattgagcagcccaagcccagaggcatgaggttcaggtacaagtgtgaggggcgctcg
gcgggcagcatcccgggagagaagagcaacgataccaccaagacacaccccgccatcaag
gtgcacaactacaatggtcccctgcgtgtccgtgtctccttggtgaccaagaacccgcct
cacaagccccaccctcacgagctggtggggaaagactgcaaacatggctactatgaggca
gacctgcaggagagacgagtacacagttttcagaacctgggcattcagtgtgtgaagaaa
aaggatgtgaacgaagcagtttcctgtagactgcagacccaaaacaaccccttcaacatt
cccgaggcgaaggtgtgggaggaggagtttgacctgaatgcagtgaggctttgtttccag
gcctcgatcactctacctaccggtgaactccaccctctggagcccgtggtgtctcagccc
atctatgacaacagagcacccaacacagcagaattgaagatctgtcgagtgaacagaaac
tctgggagctgcagaggaggggacgagatcttcctactctgtgacaaagtgcaaaaagag
gacatcgaggtacggttcttccaggactcgtgggaggggaagggcaccttctcccaggcg
gacgtccacaggcaggtggccatcgtgttccgtaccccgcccttctacgacaccaacctg
actgagccaatcagagtgaagatgcagctccgcaggccctcggaccgcgaggtcagcgag
ccaatggacttccaattcctgccctccgacccagatgaatatagactgatagagaagcga
aaacggacagagggaatgttccagaatctgaagctggggtccatatcagtggccatgcca
gcagagaggcctttcaacactgccagaagaacagtcgccgccaagccagtagctagccag
cctgtgaacccagtggcgccccctcgtgccacctctgtgaagccccagccgtactacgac
agcccccagcctggccagctgttccaaacccagcccaaagcagagccctcctcctccact
ccagcagagacctggaagttcctcaacagcctgaccttggactcccaacacaaagccacc
cccgtggcccgattcaccaccaacccccaggcatctgcagccacctcacaggccttcccc
accgtcaacctgtcggacctccacggcttcaccttctccacctttgctagtccccaggag
ccagtgagcgcagccgctaccccagagcccacctctaccttcggggtccaggattcccag
ttcagggtggatggccccatggtggatgaggagctacccgagttccccagcttctctgag
gtccaccagtcagggacactagatagcataaacatcgacgacttccaggctatgctggtc
cagagtggtctggctggagaggggccagggaacagtagggtgtcggtctctcaggcaccc
tgccacttacctgccaccaaccctgtggtcaacaacagctgtggcggcagcacctggatg
aactaccccaacagcatcgtgaacctgctccagagtgagggcatggtcgacagttctcct
ggcaactccagccagccggccgtcctcgacgacctggacgtcttcagctccatagacgaa
gaccgtctcatgtccatcctgaacagtggcaactag

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