Salmo salar (Atlantic salmon): 106609037
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Entry
106609037 CDS
T04363
Name
(RefSeq) lumican-like
KO
K08122
lumican
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sasa00535
]
106609037
Proteoglycans [BR:
sasa00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
106609037
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Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_6
LRR_9
Motif
Other DBs
NCBI-GeneID:
106609037
NCBI-ProteinID:
XP_014062850
UniProt:
A0A1S3SET5
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Position
ssa07:26204586..26207628
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AA seq
360 aa
AA seq
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MDSCHFLKGSCSVVPSTVMFPLRVPIFAVLVSLTVGQYDDYDYQPASQYGPSSANCAQEC
ECPINFPTAMYCDSRNLKFVPIVPSGIKYLYLQNNLIEEIKAGVFDNVTAELRWLVLDHN
QITNEKVAKGTIDKLTGLHKILFSFNKLTEAVIPPSKSLDELKMMNNQLSKFPAGSLAGM
QNLTSVHLQNNELTSKALNGVFKGLNKLVAIDLTNNKLKKLPSGMPSSLETFYGDHNDIS
SIAAGDLKELPKLAYLRLAYNQMTDAGIPAGVLNVTSLIELDLSYNKLQSIPEINEQLEH
LYLQVNQINKFNLENICKFSGPLNYSRLKTLRLDGNNLTHADLPHDSSNCLRQASDIIFD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggactcttgtcatttcctgaagggttcctgctcggttgtccctagtacagttatgttt
cccctccgtgtccccatctttgccgtgctggtcagcctgaccgtgggtcagtacgatgac
tacgactaccagccggcctcccagtacggcccatccagcgccaactgtgcccaggaatgc
gagtgccccatcaacttccccactgccatgtactgtgactcccgcaaccttaagtttgtg
cccattgtgccctcaggcatcaagtacctgtacctgcagaacaacctgatcgaggagatc
aaggctggggtcttcgacaacgtcacagctgaactccgttggctggttctggaccataac
cagatcaccaatgagaaggtggccaagggaaccatcgacaagctgaccggacttcataag
atcttgttcagcttcaacaaactgacggaagctgtgatccctccctccaagtcattggac
gagctaaagatgatgaacaaccagctgtccaagttccccgcagggagtctggccggcatg
cagaacctgacctcggtccacctccagaacaacgagctgacctctaaagctcttaacggg
gtcttcaagggcctcaacaagctggtggccatagacttgaccaacaacaagctgaagaag
ctgccctcaggcatgcccagttcgctggagaccttctatggcgatcacaatgacatcagc
agcattgccgccggggacctcaaagagctgcccaagctggcgtacctgaggttggcctac
aatcagatgacggacgcagggattccggcgggcgtgttaaacgtgacgagcctgatcgag
ctggatctgtcctacaacaagctgcagtccatccctgagatcaacgaacagctggagcat
ctctatctgcaggtcaaccaaatcaacaagttcaacctggagaatatttgcaagttctct
ggccctcttaactactccagactgaagaccctgcgtctggatgggaacaacctcacacat
gccgacctaccccatgactcctccaactgcctgcgccaggcctctgacatcatcttcgac
taa
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