Syntrophus aciditrophicus: SYN_02798
Help
Entry
SYN_02798 CDS
T00346
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sat
Syntrophus aciditrophicus
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sat03032
]
SYN_02798
03400 DNA repair and recombination proteins [BR:
sat03400
]
SYN_02798
Enzymes [BR:
sat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SYN_02798
DNA replication proteins [BR:
sat03032
]
Prokaryotic type
DNA Topoisomerases
SYN_02798
DNA repair and recombination proteins [BR:
sat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SYN_02798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
zinc_ribbon_9
Auto_anti-p27
Zn_ribbon_recom
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
ABC77251
UniProt:
Q2LT40
LinkDB
All DBs
Position
complement(1396300..1398609)
Genome browser
AA seq
769 aa
AA seq
DB search
MPDSLIIVESPTKVKTLKKYLGADYEVLASKGHIKDLPKKTLGIDPQNEFQPTYSVIDDK
KKVIADLKKAAKNVSRIFLAPDPDREGEAIAWHIAEEIKAKNKEIYRVLFNDLTKNTILD
AINHPGKLDFNKYEAQQTRRILDRLVGYQISPILWEKVKRGLSAGRVQSVAVRMICDREE
EIKRFIPEEYWNISVQLKGVTPPPFEARLIKITGKKAKVKNEAQANEIVSRLSGGVKSGS
KPTINLSEDRDLQPQFVVSKLEKKEVKKESLPPFTTSKLQQEASRLLRFSAKKTMATAQK
LYEGIELGEEGPVGLITYMRTDSVRIAEDALKEVRSYIRENYDPPFLPAKARFFKSKGKT
QDAHEAIRPSSMNYNPQKIKHFLSADQFRLYQLIWNRFVASQMNPALYDQTTVEVSADFY
TFRAQGAILKFPGYTIVYTEGKEDKEQNEEMESGKILPDLNEGERLTLLKITPEQKFTQP
PPRFSEASLVRELEEQGIGRPSTYAAILSTIQDRNYARLEQGKFHPTELGTIVTELLVKN
FPKVMDVSFTASLENQLDLIEEGKQKRIETLQEFYAPFEEDLSKARLEMKNIKREETPTD
LICEKCQSPMVIKWGKNGKFIACSNYPACKNTRNIEQGEGVERSAKGGEMTDTVCPKCGK
NMLIKHGRFGRFLGCSGYPDCKHTMPISLGVKCPQEGCDGEIIEKRTKKGRSFFGCSNYP
NCTFAVWDKPIPEPCPQCNSPFLVEKYSRTEGSYKACPNKDCGYRDDQS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgccggattccctgattatcgttgaatctcccacaaaggtaaaaactctaaaaaaatat
ctcggtgcggactatgaggtcctggcttcgaagggacatatcaaggacctgcccaagaag
acgctgggcatcgatccccagaatgagtttcagccgacatacagcgtcatcgatgacaag
aaaaaggtcattgccgatttaaagaaggcagcgaaaaatgtcagccgcatctttcttgca
cccgatccggatcgtgaaggggaggcaattgcctggcacatcgcggaagaaatcaaagcc
aagaacaaggaaatttatcgtgttctgttcaacgatctgactaaaaatacgatactggat
gcaatcaaccatcccggtaagctggacttcaataaatatgaagcgcaacagaccagacgc
atccttgaccggctggtcggttatcagatcagccccatcttatgggaaaaagtaaaaaga
ggactcagtgcggggcgcgtccagtcggtagctgtccggatgatctgcgaccgggaagag
gagatcaaacgcttcatccccgaagaatactggaacatttccgttcagttgaaaggcgtc
acccccccgccctttgaagccagactcatcaagatcaccggcaaaaaggcaaaagtaaag
aatgaagctcaggccaacgagattgtgtctcgcttatcgggaggcgtcaaatccggctca
aaaccaactatcaatctatctgaagatcgggatttgcagccgcagtttgttgtcagcaaa
cttgaaaaaaaagaggtcaagaaagaatccctgcctcctttcacaacgagcaagctgcaa
caggaagcctcacgtttgctgcgtttctctgcaaaaaaaaccatggcgactgcacagaag
ctttacgaagggattgaactcggtgaagaaggccctgtcggcctcattacctacatgagg
acggattccgtgcggatcgccgaggatgctctgaaggaggtccgatcttacatccgtgaa
aactacgatcctccatttctgcctgcaaaagcacgtttctttaaaagcaaagggaaaacg
caggatgcccacgaagccatccgtccctcgtcgatgaactacaatcctcagaaaatcaag
cactttctgagtgccgatcaattccgtctttatcagttgatctggaatcgcttcgtggca
agtcagatgaatccggctctttatgatcaaacaacggttgaagtttccgcggatttttat
acattccgcgcccaaggggcgattctcaagttccccggttataccattgtgtataccgag
ggcaaagaagacaaggaacagaatgaggaaatggagtcgggaaaaattctgccggacttg
aatgaaggggaacggcttactctcttgaaaatcacgccggaacagaaattcacgcaaccc
cctcccagattttcagaagcctcactggttcgtgaactcgaagaacaaggcattggaagg
ccgagcacttatgcggcaattctgagcaccattcaggaccggaattatgcccggcttgaa
cagggaaagttccatcctaccgaactgggaacgatcgttacggaacttctggtaaaaaac
ttccccaaggttatggacgtttctttcacggcttccttggaaaaccagctcgacctgatt
gaagagggaaagcagaaacgcatcgaaacgttgcaggaattttatgctcctttcgaggaa
gacctcagcaaagccaggctcgaaatgaaaaatatcaagcgggaagagacccccaccgat
ctgatatgtgaaaaatgtcagagtccaatggtcataaaatggggtaaaaacggtaaattc
attgcctgctccaactatcccgcatgcaaaaatacaagaaatatcgagcagggcgaaggt
gtcgaaagaagtgccaagggaggtgaaatgacagatacggtttgcccgaaatgcgggaag
aatatgctcattaagcatggcagattcggtcgttttctgggatgctccggctatcctgac
tgtaagcacacgatgcctatcagtcttggtgtgaaatgtccacaggaaggatgtgacggc
gagataatcgaaaagcgcacaaaaaagggaagaagtttttttggctgttccaactacccg
aattgcacctttgctgtctgggacaagccgataccggagccctgtcctcagtgcaattcc
ccgtttctggtcgaaaaatactctcgcacagaaggaagctataaggcctgtcccaacaag
gattgtggatacagggatgaccagtcataa
DBGET
integrated database retrieval system
