Syntrophus aciditrophicus: SYN_02852
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Entry
SYN_02852 CDS
T00346
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent helicase HrpA [EC:
5.6.2.6
]
Organism
sat
Syntrophus aciditrophicus
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SYN_02852
Enzymes [BR:
sat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SYN_02852
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
nSTAND3
HA2_N
AAA_30
T2SSE
SRP54
PhoH
AAA_16
SLFN-g3_helicase
NACHT
AAA_25
AAA_23
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABC77196
UniProt:
Q2LSZ0
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All DBs
Position
1340346..1344194
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AA seq
1282 aa
AA seq
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MQETIHVNKRPGRMRSGNKKELRRKNRPRVTYPADLPITARRREIVQAIARHRVVVITGE
TGSGKTTQLPKMCLEAGRGINGIIGCTQPRRVAAVTVAERIAEELGQTVGQAVGYRIRFE
DRSGPSPYIRIMTDGILLMETQSDPLLHAYDTIIVDEAHERNLNIDFLLGYLKTLLRKRN
DLKIIITSATIDTEKFAAAFDGAPVIEVTGRVYPVEVLYRPIEQGDGDEEITHVEAAVRA
VEELRARRSDRGDILIFMPTEQDIRDTCELLEGRRYENLVILPLFARLSWAEQRRIFSAT
TAQKIIVATNIAETSLTIPGIRYVIDTGYARVSQYNPRTRTNSLPVRAISRSSADQRKGR
CGRVQNGVCIRLYEEEDYLNRPQFSVPEILRSNLAEVILRMLKLRLGHPAAFPFIDAPNP
KSVRDGFEILKELGAISIEKNRNSREEGNGEADVRLTERGRRMARLPMDPRIARILLEAE
KEGCVEEATIIASGLCIQDPRERPVDEEGLADAAHRVFLDPTSDFLTLLRIWDKYQRAQE
TLKSQGKMRKYCRVNYLSWRRMREWKDIYEQIRTIRREEEKADRSISKKLAAAPEDLNAA
IHRSILSGYLSGIAVKKEKNIYSATRGREVMLFPGSGLFNSGGNWIVAAEMVETSRLFAR
IAANISSEWIEELAGNLCTSTYSEPHWEKRREEVVAYQQVSLFGLVIVPQRKVSYAHIDP
EEASRIFVRSALVEGELKTPLPFLLYNRQLVAEVIGMEDKIRRRDLLQDESVLNDFYASR
LPGICNVRTLKRKIREQGGDAFLRMTPADVLTRLPDEEELSLFPDEVTVGGRSYRCVYRF
DPGKADDGVTLKIPDVLLPDVPAAAADWMIPGHLRDRILALLRGLPKEYRKKLQPLAGTA
DYIVKHLGGPSGPLLSAVAGLLRERLGVDIPASAWSAREVPDFLQVRFAVVDGEGREKAA
GRDLSLLQQTLTAEQDSRAFEQARRKWEKSDLTAWDFGEIPESIDLHANGSFKGCAWPAL
TPGDGCVHLRLYKTREEAACVHREGIAALYGLYFTRELKELKKALKLTEPLKTWAESFIG
VRNMESRLLEKVKKDLFAVDVRTAEDFEAHARKIAGKILISGQEGIRTVEPLLKAWFEIA
GDFRNLEIVNRGNSGAREFILQLRREMEGLLPADFLCRFDAGRLSHIPRYLKALKIRAER
GLLNPEKDRRRERELLPFVTRHNELVQNMTSGVSDEKQQALADLSLMIEEFKVSLFAQEL
KTAFPVSARRLEEKLNEIVRMF
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagaaacaatccatgtaaataaacgtccggggcggatgcgctccgggaataagaag
gagcttcggcggaaaaaccgtccccgggtgacctatccggcggatctgccgattacggcc
cggcgaagggaaatcgttcaggccatcgcgcgtcatcgcgtggtggttattacgggagag
accggttcgggaaagacgactcagctccccaagatgtgcctggaggcagggcgaggcatc
aacgggatcatcggctgcacgcagccccggagggtcgccgcggtgactgtggcggagcgg
attgccgaggaactggggcagaccgtcggccaggcggtgggctaccgcatccgctttgaa
gaccgttccggtccttccccgtatatacggatcatgaccgacggcattctcctgatggaa
acccagtcggaccctctcctgcacgcctacgacacgatcatcgtcgatgaggcgcacgag
cggaatctcaatatcgactttctcctcggttacctgaaaaccctcctgcggaagagaaac
gatctcaagatcatcatcacctcggccaccatcgatacggagaaattcgccgccgccttt
gacggcgctccggtaatcgaagtcacgggaagggtttatcccgtggaagtcctttaccgg
cccatcgaacagggtgacggagacgaggaaatcacccacgtcgaagccgcggtgcgggct
gtggaggaactgcgagccaggcgttccgaccgtggagacatcctgatttttatgcccacg
gaacaggacatccgggacacctgtgagctgcttgagggaagacgctatgagaacctggtc
attcttcccctttttgcccgtctgtcctgggcggagcagcgccgcatcttttcggcgacg
accgcgcagaaaatcattgtagccacgaacattgccgaaacctcgcttaccatccccggc
atccgctacgtgattgacaccggttacgcccgtgtttcccagtataatccgcggacccgg
accaacagcctccccgtgcgggcgatatcacggagcagcgccgatcagcgcaaagggcgg
tgcgggcgcgtgcagaacggcgtctgcatccggctttacgaggaagaggattatctgaac
cgtccccagttttccgtaccggaaattctgcgctccaatctggcggaggtcatcctccgc
atgctgaaacttcgattgggccacccggcggcttttcccttcatcgatgccccgaatccc
aaaagcgtccgcgacgggtttgaaatcctgaaggaactgggagccatctccatcgagaaa
aacaggaacagcagagaagaagggaatggggaagcggacgtgcggctgaccgagagaggg
cgccggatggcccgtctgcccatggacccgcggattgcccggattcttctggaggcggaa
aaggaagggtgtgtggaggaagcgacgatcatcgcctccgggctctgcattcaggatccc
cgggagaggcccgtcgatgaggaaggcctggccgacgcggctcatcgcgtttttctcgat
ccaacgtccgattttctgacgctgctgcgcatctgggacaagtatcagagggctcaggag
acgctgaaaagtcagggaaagatgcggaaatactgccgggtgaactatctgtcctggaga
agaatgcgggaatggaaagacatttacgagcagatccggacaattcggcgcgaagaggaa
aaagcggaccggagcatctcgaaaaagttagcggcggctccggaagatctgaacgccgcc
atccaccgctccatcctcagcggctatctgtccggcattgccgtcaagaaggagaaaaac
atctattcggcgactcggggaagggaagtcatgctctttccgggttcgggactcttcaat
tccggggggaactggatcgtggccgctgaaatggtggagacgtcccggctcttcgcccgc
atcgccgcgaatatttccagcgagtggatcgaggaattggccggaaatctctgcacctcc
acctattccgaaccgcactgggaaaagcgccgggaagaggttgtggcttatcagcaggtc
tcgcttttcggcctggtcatcgttccgcagcgaaaggtgtcatacgcgcatatcgatccc
gaggaagcctcgcgcatctttgtccgcagcgccctggtggaaggggagttgaaaacgcct
ctgccgttcctgctctacaaccgtcagctcgtggcggaggtcatcgggatggaggacaaa
atccgccgccgcgatcttctccaggatgaatccgtgctgaacgatttttacgcgtcgagg
ctgccggggatctgcaatgtgcggacgcttaagagaaagatccgggaacagggcggcgac
gcctttctgaggatgactcccgcggatgtcctgacccggcttcccgatgaggaggaatta
tcccttttccccgacgaggtgaccgtcggagggcggagctaccgctgcgtctaccgtttc
gatccgggcaaggccgacgacggcgtgaccctgaaaattcccgatgtcctgctgcccgat
gtccctgccgcggctgccgactggatgattccgggacatctgcgggaccggattctggcc
ctgcttaggggactgcccaaggagtatcgtaagaaacttcagccgctggccgggacagcg
gattacatcgtaaagcatctgggcggcccctcaggtccgcttctttccgccgtggccggc
ctgctccgggaaagactgggtgtggacatccccgcatcggcctggtccgccagagaagtc
cccgatttcctgcaggtgcgctttgccgttgtggatggcgagggtcgcgagaaggctgcc
ggccgggacctctcgttacttcagcagaccctgaccgcggagcaggattcccgggctttt
gaacaggcgcggagaaaatgggaaaaatcggatctgacggcgtgggatttcggggagatt
cctgaatccatcgatctccacgcgaacgggtcattcaagggatgcgcctggcctgccctg
accccgggagacggatgcgtccatctccgcctttataagacccgtgaggaagcggcctgc
gtgcatcgggaagggatcgctgcactttacggcctttattttacccgggagttgaaagag
ctgaaaaaggcgctcaaattgacggaaccattgaaaacctgggcggagtcttttatcggc
gttcggaatatggaaagccggctgctcgaaaaggtgaaaaaagatctctttgccgtggat
gtccggacagcggaggatttcgaggcccatgcccggaagatagcggggaagatattgatc
tccggacaggaggggatcaggactgtggagcccctgttgaaggcctggttcgaaatcgcg
ggagatttcaggaatcttgagatcgtcaaccggggaaacagcggggcgcgggaattcatt
cttcaacttcgacgggaaatggagggactgctgccggcggattttctgtgccgcttcgat
gcggggcggctttcgcatatcccccgttatctgaaggccctgaagatacgcgccgaacgg
ggcctgctcaatcctgaaaaagaccggcgccgggaacgggagcttcttcctttcgtcacc
cggcataatgaacttgtgcaaaacatgacgtccggtgtctccgatgaaaagcagcaggct
cttgcagacctttccctgatgatcgaggagttcaaggtgtcgcttttcgcccaggagctg
aaaacggctttccccgtatccgcccgtcggctcgaggaaaaactgaacgaaatcgtcagg
atgttttaa
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