KEGG   Streptomyces autolyticus: BV401_23570Help
Entry
BV401_23570       CDS       T04980                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sauo  Streptomyces autolyticus
Pathway
sauo03030  DNA replication
sauo03410  Base excision repair
sauo03420  Nucleotide excision repair
sauo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sauo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BV401_23570
   03410 Base excision repair
    BV401_23570
   03420 Nucleotide excision repair
    BV401_23570
   03430 Mismatch repair
    BV401_23570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sauo03032]
    BV401_23570
   03400 DNA repair and recombination proteins [BR:sauo03400]
    BV401_23570
Enzymes [BR:sauo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BV401_23570
    6.5.1.6  DNA ligase (ATP or NAD+)
     BV401_23570
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BV401_23570
DNA replication proteins [BR:sauo03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    BV401_23570
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     BV401_23570
DNA repair and recombination proteins [BR:sauo03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BV401_23570
   NER (nucleotide excision repair)
    Other NER factors
     BV401_23570
   MMR (mismatch exicision repair)
    Other MMR factors
     BV401_23570
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_A_N RNA_ligase DUF3341 EII-Sor
Motif
Other DBs
NCBI-ProteinID: AQA12981
UniProt: A0A1P8XXY6
LinkDB All DBs
Position
complement(5859614..5861152)
Genome map
AA seq 512 aa AA seqDB search
MLLADVARTSRQVAATSARSEKIAALARLFRRTEPAEAAVVITYLAGKLPQRRTGVGWST
LRHRREPAAEPTLTVLDVDEALSRVAAVSGSGATAARKRLVGELLSAATKEEQGFLLGLI
GGELRQGALEGLAVEGLAEAVGAPAAEVRRAVMLGGSLGAVAGALLARGPQALADFRLEV
GRPVLPMLAQSAKDLDEAMDRLGPCAVEEKLDGIRVQVHRDGADVRIYTRTLDEITDRLP
EVVTAARELAVDRAILDGEVILLDAEGRPRPFQETSGRVGSRLDVPGASAALPLSPVFFD
LLVVDDRDLLDLPAHERHAELARITPGPRRVRRLVADDPADPETRRAAREFAADVLARGH
EGVLVKALEAPYGAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGKLSNLHLGARAADG
TYLMLGKTFKGLTDAMLEWQTEALLGIAVSDDGWVVRVRPELVVEVAFDGLQRSSRYPAG
VTLRFARVLRYREDKPADQADTVETVLALRAG
NT seq 1539 nt NT seq  +upstreamnt  +downstreamnt
atgctgctggctgatgtcgcgcggacctcccgccaggtcgcggccacctccgcccgctcg
gagaagatcgccgcgctggcccggctgttccggcgtacggaaccggccgaagcggccgtg
gtgatcacctacctcgcgggcaagctgccccagcgccgcaccggagtgggctggtccacc
ctgcgccaccggcgggaacccgccgccgagcccacgctgacggtgctcgatgtggacgag
gccctgagccgggtagcggcggtctccggcagcggtgcgacggcggcccgcaaacggctg
gtgggcgagctgttgtccgccgcgaccaaggaggagcagggttttctgctcggcctgatc
ggcggcgagctgcggcagggggcgctggagggactggccgtggaggggctcgccgaggcg
gtgggcgcaccggccgccgaggtgcggcgggcggtgatgctcggcggatcgctgggcgcg
gtcgcgggggcgctgctggcgcgcggcccgcaggcgctggccgacttccggctcgaggtg
gggcggccggtgctgccgatgctcgcccagagcgccaaggacctcgacgaggccatggac
cggctggggccgtgcgcggtcgaggagaagctggacgggatccgggtgcaggtgcaccgg
gacggcgcggacgtacggatctacacccgcaccctcgacgagatcaccgaccggctgccg
gaggtcgtcacggccgcgcgggagctggcggtggaccgggcgatcctcgacggcgaggtg
atcctgctggacgccgaggggcggccccggccgttccaggagacctcgggacgggtcggc
tcccggctcgatgtgcccggggcgtcggccgcgctgccgctgtcccccgtcttcttcgat
ctgctcgtggtggacgaccgcgatctgctcgacctcccggcccatgagcgccatgccgaa
ctggcccggatcacccccgggccccggcgggtgcggcggctggtggccgacgacccggcg
gatccggaaacccggcgggcggcacgggagttcgccgcggacgtgctggccaggggccat
gagggggtgctggtcaaggcgctggaggcgccgtacggcgcgggccggcgcggggcgtcc
tggctgaaggtcaaaccggtgcacaccctcgacctggtggtgcttgcggcggagtggggg
cacggccgccgcaccgggaagctgtccaacctccatctgggcgcgcgggcggcggacggc
acgtatctgatgctgggcaagaccttcaaggggctcaccgacgcgatgctggagtggcag
acggaggcgctgctggggatcgcggtcagcgacgacggctgggtggtgcgggtgcggccg
gagctggtggtggaggtggccttcgacgggctccagcgctcgtcccgctatccggcgggc
gtcacactgcggttcgcgcgggtgctgcgctaccgggaggacaagccggcggatcaggcg
gacacggtcgagacggtgctggcgctgcgagccgggtga

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