Sulfobacillus acidophilus TPY: TPY_0846
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Entry
TPY_0846 CDS
T01576
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
say
Sulfobacillus acidophilus TPY
Pathway
say03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
say00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TPY_0846 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
say03400
]
TPY_0846 (uvrB)
DNA repair and recombination proteins [BR:
say03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TPY_0846 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TPY_0846 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA
Microtub_bd
HEM4
DUF87
Motif
Other DBs
NCBI-ProteinID:
AEJ39036
LinkDB
All DBs
Position
793038..795059
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AA seq
673 aa
AA seq
DB search
MGVDLMQSPFQLVSPYEPTGDQPKAIRELLEGFQAGLTRQVLLGVTGSGKTFTMANVIQE
MGVPTLVLAPNKTLAAQLAGELKAFFPHNAVEYFVSYYDYYQPEAYIPQTDLYIEKDAQI
NDEIDKLRHSATSALLERPDVIVVASVSCIYGLGSPEDYRDLVLSLRVGMERDRQAILRK
LVEIQYDRNDVNFVRGKFRVRGDVIEVFPANRSEQAIRIEMFGDEIERIREFDVLTGEIL
GDREHVAIYPASHYVMGQNRLQPALQSIERELEERLRELKAQGKDLEAQRLENRTRYDLE
MLQEVGFCSGIENYSRHFTGRRPGEPPFTLLDYFPDHFLTIVDESHVSVPQIRGMYAGDR
SRKESLVEHGFRLPSAFDNRPLTFEEFTQRIDQVLFVSATPGPYELSVTEKTVEQIVRPT
GLLDPRIDVRPTTGQIDDLLGEIRHRVDRGLRVLVTTLTKRMAEDLTEYLREHGIRVRYL
HSDIDALERMAIIRDLRLGEFDVLVGINLLREGLDLPEVGLVAILDADKEGYLRSVTSLV
QTIGRAARNVDGTVIMYADRVTESMQHAISETERRRRIQEEYNRAHHITPQTVQKAVRDV
IQATRQTGPALPDKKVQDLTARERVKLINQIRKEMKEASRNWEFERAAMLRDMLLELEKE
QPVKKVSGGRRRG
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggatttgatgcagagtccgttccaactcgttagcccctatgaacccacaggg
gatcaaccgaaagcgattcgggagctcttagagggatttcaagccggcctcacccgacag
gtacttttaggggtgaccggatcgggaaaaacgtttaccatggcgaacgtcattcaagag
atgggcgtaccgacgttggtgctggctcccaataagacgttggcggcccagttggccggc
gagttaaaagcgttttttccgcataatgccgtcgagtatttcgtcagctactatgattac
tatcagccggaagcctatatcccacaaacggatctttatatcgaaaaagacgcccaaatt
aacgacgaaattgacaagttacgccactcggccacttcggctttgctggaacggcccgac
gtgattgtggtggcgtcggtatcgtgtatttacgggttaggctcgcccgaggactatcgc
gatttggtgttgtctttacgggtgggcatggagcgggatcggcaagcgatattacgaaaa
ttggtggagattcaatacgatcgtaacgacgtgaattttgttcgtgggaagtttcgcgtg
cggggcgacgtcattgaggtgtttccggccaaccgcagtgaacaagccatccgtatcgaa
atgttcggcgacgaaatcgaacggattcgggagttcgatgtcttaaccggcgaaattctc
ggcgatcgggagcatgttgcgatttatcccgcgtcgcactacgtaatgggccaaaatcgg
ctccaaccggcgttacagtccattgaacgggaattggaggagcgtctacgggaactgaag
gcccagggcaaagacctcgaagctcaacggctggaaaatcgtacccgttatgatctcgag
atgttacaggaagtgggattttgctccggtattgaaaattattcccgacattttaccggt
cgccggcccggcgagcccccgtttacgttacttgattattttcccgaccactttctcacc
attgtcgacgaatcgcatgtgagcgtaccgcaaattcgggggatgtatgccggggatcgc
tcgcggaaagagagtctggtggagcatgggtttcgtctgccgtcggcatttgataaccga
ccgctgacatttgaggagttcacgcagcgcattgatcaagtgctcttcgtctcggccacg
cccggcccctatgaattgtccgtcacggaaaaaactgtggaacaaatcgtgcggccgacc
gggctattggatccccgaattgacgtgaggcccacgaccggtcaaattgacgatctttta
ggcgagatccgccatcgggtcgatcgcgggcttcgggtcttggtcaccacgttgaccaaa
cgcatggcggaagacctgaccgaatacctgcgcgagcacggcattcgtgtgcgctatttg
cattcggatattgatgctctggaacggatggccatcattcgggatttgcgcctcggagaa
ttcgacgttctcgtgggcatcaacttgttgcgcgagggcctcgatctgccggaagtgggg
ttggtggcgattttagatgcggataaagaaggttatctgcgctcggtcacgtccttggtg
cagacgattgggcgggcggcccgcaatgtggacggaacggtcattatgtatgccgatcgc
gtcaccgaatccatgcagcacgccatttcggagaccgagcggcgccgtcggattcaagaa
gagtataatcgagcgcatcacattaccccccagacggttcaaaaagcggtgcgcgacgtc
attcaagccactcggcagaccggcccggcgttacccgataaaaaggtgcaagacctcacg
gctcgggaacgggtaaaactgattaaccagattcgcaaggagatgaaggaagccagccgc
aattgggagtttgaacgggcggcgatgctgcgtgacatgttactggaattggaaaaagaa
cagccggtcaagaaggtctcgggaggcaggcggcgtggctag
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