Shewanella amazonensis: Sama_1359
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Entry
Sama_1359 CDS
T00445
Name
(GenBank) 3-methylcrotonoyl-CoA carboxylase, alpha subunit
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
saz
Shewanella amazonensis
Pathway
saz00280
Valine, leucine and isoleucine degradation
saz01100
Metabolic pathways
Module
saz_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Sama_1359
Enzymes [BR:
saz01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
Sama_1359
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
HlyD_3
MCC_alpha_BT
Biotin_lipoyl_2
RimK
ATP-grasp_3
GARS_A
ATPgrasp_ST
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ABL99566
UniProt:
A1S5B0
LinkDB
All DBs
Position
complement(1647559..1649580)
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AA seq
673 aa
AA seq
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MFNKLLIANRGEIACRVIRTARDMGIKTVAVYSDADRDARHVALADESFYLGESAPASSY
LRGELIIDIAKKCGAEAIHPGYGFLSENAAFARACEASGIAFVGPGSDAIDAMGSKSAAK
LIMEKAGVPLVPGYHGDDQSDATLLAEAKKIGYPLLIKAAYGGGGKGMRIVESESELKAA
IDSARREAASSFGNDKLLMERYLRQPRHVEVQVFADSQGNCVYLSDRDCSIQRRHQKVVE
EAPAPGLPDSLRKQMGEAAVAAAKAIDYRGAGTVEFLLDVDMSFFFMEMNTRLQVEHPVT
EMVTGQDLVKWQLLVAAGAQLPLEQHEIQIHGHAFEVRIYAEDPNNEFLPASGKLTFLRE
PEPSRHVRIDSGVRENDVISNYYDPMIAKLIVWDESRPRALARLTRALGDYRVGGLKHNI
EFLSNIAEHPAFAQANFSTDFIGRYGDALIGDSRDEADTAFVLAVLTQLRLREAVSQDVA
GHDPFSPWSSLKGFRLSSPRRHSVTLLDDAHQSRSAELTESNGRYQLCLNDKLIELSGSI
EDSELKCEINGHKMKVTVSLEDGGLTVFLSSGSYHFREVLGQVLEETASSEDKLKAPMNG
TVVTHLVAAGDKVSAGQGLLVMEAMKMEYTIEAPFDGVVSEFFFAPGELVSDGTLLLALE
MADAAADSKETEA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaactcttaattgccaatcgcggcgaaattgcctgccgcgttatccgcacc
gcccgcgacatgggcattaaaaccgtggccgtctactcagatgccgaccgcgacgcccgc
catgtggcgctggcagatgagtctttttatctgggtgaaagcgccccggcgagctcttat
cttcgcggtgagctgattatcgatatcgccaaaaaatgcggcgccgaggccattcacccc
ggttacggctttttgtcggaaaacgctgcttttgcccgcgcctgtgaggcaagcggcatc
gcctttgtgggcccgggctcagacgccatcgacgccatgggcagcaaaagcgccgccaag
ctgattatggaaaaagccggtgtgcccctggtacccggttaccacggcgacgaccaaagt
gatgccaccctgcttgctgaagccaaaaaaattggttatcccctgcttatcaaggccgcc
tacggtggtggcggcaagggcatgcgtattgtcgagagtgagagcgagcttaaagcggcc
atcgactcggcccgccgcgaggccgcctcaagctttggcaacgataaactcttgatggag
cgttatctgcgtcagccgcgccacgttgaggtgcaggtgtttgcagactcacagggcaac
tgcgtgtatctgtctgaccgcgactgctctattcagcgccgccaccaaaaggtggtggaa
gaagcccctgccccgggcctgccggacagcctgcgcaagcaaatgggtgaagctgccgtt
gccgctgccaaggccatcgactatcgcggcgccggtaccgtggagttcctgcttgacgtc
gatatgagcttcttctttatggagatgaacacccgtctgcaggtagagcacccggtgacc
gaaatggtcactggtcaggatttggtgaaatggcagctgctggttgctgcgggtgcccag
ctgccactggagcagcacgaaatccaaatccatggccacgcctttgaggtgcggatttac
gccgaagatcccaataacgagtttttgcctgccagtggcaagctcacctttttgcgtgag
ccagagccaagccgtcatgtgcgcatcgactctggcgtgcgtgaaaatgatgtgatttca
aactactacgaccccatgattgccaagctgattgtgtgggacgagtcgcgcccccgcgcg
ctggcacgccttacccgcgcccttggcgattaccgtgtgggcggacttaaacacaatatc
gagtttctctccaacatcgccgagcatccggcgtttgcacaggcgaacttttccaccgac
tttatcggccgctatggtgatgcgctgattggcgacagtcgcgacgaagcagacaccgcc
tttgtgctggccgtgctcactcagctgcgtttacgtgaggctgtgtctcaggacgtggct
ggacacgaccccttcagcccctggtcgagcctgaaaggctttcgcctaagcagcccaaga
cgccacagcgtaaccctgctggatgacgctcaccaaagccgcagcgcagagctcaccgag
tcaaacggccgctatcagctgtgccttaacgacaagctgattgagctaagcggcagcatt
gaagacagcgagcttaagtgcgaaatcaacggccacaaaatgaaggtgacagtatcgctg
gaagacggcggcctcaccgtgttcctctcaagcggcagttaccacttccgtgaagtgctc
ggccaggtgctggaagaaaccgcgagctcagaagataaactcaaggcaccgatgaacggc
actgtggtgacccatctggtggctgcgggcgataaagtcagcgccggtcagggtttgctc
gtgatggaagccatgaagatggaatacaccatagaagcgccctttgatggggtggtgagc
gagttcttctttgcccccggcgagctggtgtcggacggtaccttgctgctggcgctggag
atggccgatgctgcagccgacagtaaagaaacggaggcctga
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