Shewanella amazonensis: Sama_1872
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Entry
Sama_1872 CDS
T00445
Name
(GenBank) sensor histidine kinase
Organism
saz
Shewanella amazonensis
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Reg_prop
HisKA_3
HATPase_c
SGL
HATPase_c_2
DUF5074
Y_Y_Y
DUF4381
dCache_1
NagJ_C
Motif
Other DBs
NCBI-ProteinID:
ABM00078
UniProt:
A1S6S1
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Position
2283634..2286774
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AA seq
1046 aa
AA seq
DB search
MSAVIRTIIYLMLLHFGNAWSAPEKIAQNVDFDSDNISAILIDKQGFMWLGTQDGLFFYD
SYQLEKFRPDADTPGTIAALDIRNLYLSRDNSLWISTNSGGLSRFNPDTRTFTNYRHNSE
DINSLSNDSVYDVADGPDGELWVATQIGLNRLNPATGQVRRYLKDDTNAASLPSNYVYTL
FVDSSNRLWIGTIGGGLAYWAGETQGFISLELPNVITDVFSIVEQDGKYLWVGTRQGLLR
ITLDNLLVRRIQPDQGNEPELMIISLHLDANQLVLGTFGQGLKFYNTDTNQLSHASQDIP
GAKDTITSMVKDSTGQLFYATWGRGAYKLDVTERNKSDDGTAKRTSLSLPNVAAMYAKSG
SNKAWVGSFSDGLHWLDLDTQRLNRFTPSTSANNINGVLSIASFGADELLVGTSEGLWHL
IGNGTVKAHFSHQPEETGSIGKGFVRVLQPDDSGDVWVGIGGDGLYKYHPDSGTFSSYTH
DPSVPDSLSGNYITSLLIDGPYLWVGTRSNGLNLCQKDSMSCQRLQVHNSGLNHFYISDI
AKDDLGNIWVGTDGGGLHKAEFHRTGVKTEVRITPEPGLAADSIKSILPGASGEVWFTTS
DGLFSYHSNQKRFHKATDRVLNGLGGFSQRSRASTGEFNLLGTNNGVYLFSSISNVEPET
QFPVRFTQIVSDSLANPILNTAIQDPFQMSVPWGGWLNVEFALLDFGSSAHSYQYRMSSE
SQWISLNNMHHLNFYKLDPGVHRLEVRGRGINQAWSQPATLHLTVIPPWWRNTTYIGLLL
VCIALVAVSYHRFRMARWERYTRHLNALKEEKLAVIEKLRQNEQHLKSAFEGMRNLATRL
QYAKEEERKSISRELHDQFGQSLTATQISLQLFRRQHPGDPKLIDTCITTIQAMIKQVRA
ISFDLRPSLLDDVGLVAGLHHQLNKMSSSLTHPIIFNADTDIPELSPELTITLFRVIQES
VTNAIRHANATRIEVKLYPDGDKIKAEVSDNGVGFEPGGISAKVSKGGHLGLLGIEERVK
SQNGNLNIKAIPHGGVSISVEFPYEK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggtaataagaactatcatttatctaatgcttttgcactttggtaacgcctgg
tccgcacctgaaaaaattgcacaaaacgtagactttgactcagacaacatttccgcaatc
ctgattgataaacaaggttttatgtggcttggaacccaagatgggttgttcttttacgat
agctatcaactggagaaattcaggccggatgctgatacgccgggcaccatcgcagctttg
gatatacgcaatctctatctgagtcgggacaacagtctctggatatccactaacagcggt
ggcctcagtcgattcaacccggacacccgcactttcactaattaccgccacaattccgaa
gatattaattccctgtccaatgacagtgtttatgacgtcgctgacggccctgacggtgag
ctttgggtagcgactcagattggattaaaccgattaaatccggcaaccggacaagtgcgc
cggtaccttaaagacgacacaaacgccgcgtccctgccctcaaactatgtttacacgctt
tttgtcgacagcagcaaccggctttggattggaaccattggcggtggactggcgtattgg
gcaggtgaaacccaaggattcatcagtttagaactgcccaatgtgataacggatgtattt
tccatcgtcgaacaggatggaaaatatttgtgggtcggcacccgccaggggttgctcagg
ataacgctggacaacctactcgtcagacgtatccagccagatcagggcaatgagccggaa
ttgatgattatttcattacatctggacgccaatcagctggttttaggtacctttggccaa
ggcctcaagttttacaacactgataccaatcagctcagtcatgctagccaggatatccca
ggcgccaaagacaccattaccagcatggtaaaagacagcaccgggcagcttttttatgcc
acctggggacgaggagcctataagctggatgtgaccgagcgaaataaatcggatgacggt
acagccaagcgcacgtcactctctttgcctaatgtcgcagcgatgtacgcaaaatccggc
agtaataaagcctgggttggctctttcagtgatggcctgcactggcttgatctcgacacc
caacgactgaatagattcacccccagtacatcagccaataacattaatggcgtgctgagc
attgcttcctttggagcggacgagctactggttggaacatcggaaggcttatggcatctg
attggcaatggcacggtgaaagcgcatttttctcaccagcctgaagagacgggctcaatt
ggcaagggctttgttagagtgctgcaacccgatgacagtggcgatgtctgggtcggcatc
ggaggtgatggcctatacaaataccatcccgacagcggaacattcagttcatatacgcac
gacccttcagtaccggattccctgagtggaaattacatcacctcacttctgatagatggt
ccttacctttgggtgggcacccgctcaaatggcttgaatctctgccagaaagacagcatg
tcctgtcagcgtcttcaggtacataacagtgggttaaaccacttttacatctccgatatc
gcaaaggacgacctgggtaatatttgggttggtaccgatggcggcggtttacacaaggct
gaattccaccggactggtgtcaagacagaagttcgtatcacgccagagccgggattggct
gcagactcgattaaatccattttaccgggagcatcaggcgaagtttggtttacaacaagt
gatggactattcagctatcactcaaaccaaaagcgctttcacaaggcaacagacagggta
ctgaacggcctgggtggattttcgcaacgttctcgagcaagcactggcgagttcaacctg
cttggcaccaataatggtgtgtatctcttttcgtcgatatccaacgtcgagcccgagacc
caattccctgtccgattcactcagattgtatctgatagcctggcaaacccaattttaaac
actgcaattcaagaccctttccaaatgtcggtcccctggggtggctggctgaatgtggag
tttgccctgctggactttggctcatcggctcatagctatcaatatcgcatgtcttctgag
agccaatggatatcgctgaataacatgcaccatttgaatttctataagctcgatccaggt
gtacaccgtcttgaagtgcggggaagaggcataaaccaggcatggagccaaccggcaaca
ctgcacctcacagtgatccccccctggtggcgaaataccacctacatcggcttattactg
gtgtgcatcgcattagtggcggtgagttatcacaggtttcggatggcaagatgggaaaga
tatacccgtcatctcaatgcgctgaaagaagagaagctcgctgtgattgaaaagctcagg
caaaacgaacaacatctgaaatccgcgtttgaaggaatgcgtaatctggccacccgcctg
caatatgccaaggaagaagagcgtaaatccatttcccgggaacttcatgatcaattcggt
caatcactcactgccactcagataagcctgcaactgttccggcgccaacaccccggtgac
ccgaaactgatagatacctgtattacgactatccaggccatgattaagcaggtacgcgca
atctcgttcgatttacgtcccagtcttctggacgacgttggtttggttgcaggtcttcac
caccagctcaataagatgtcatcgtcattgacgcaccccattatctttaatgcagacaca
gatatacctgaacttagccccgagctgaccattactctattcagggtaattcaggagtca
gtcaccaatgccattcgccatgcaaatgccacgcgaattgaagtaaagctttacccagac
ggtgacaagatcaaggccgaggtttctgataacggcgttggcttcgaacccggtggcatt
tccgctaaagtcagcaaaggtggccatttgggcctattgggtattgaggagcgggtaaag
tcccaaaacggtaatttgaatatcaaagccattccccatggcggagtctccatttcagtt
gagtttccttatgaaaagtaa
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integrated database retrieval system
