Shewanella amazonensis: Sama_1902
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Entry
Sama_1902 CDS
T00445
Name
(GenBank) Exodeoxyribonuclease V
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
saz
Shewanella amazonensis
Pathway
saz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sama_1902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saz03400
]
Sama_1902
Enzymes [BR:
saz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Sama_1902
DNA repair and recombination proteins [BR:
saz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sama_1902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
SH3_13
Helicase_RecD
RecD_N
AAA_11
AAA_22
UvrD-helicase
SLFN-g3_helicase
UvrD_C
nSTAND3
AAA_16
AAA_28
Mg_chelatase
T2SSE
TrwB_AAD_bind
AAA_18
Flavi_DEAD
NTPase_1
SRP54
ResIII
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABM00108
UniProt:
A1S6V1
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All DBs
Position
2325741..2327636
Genome browser
AA seq
631 aa
AA seq
DB search
MIELSGKPCSSDALKAQLKLWQSQGELSALDRHFALQMAELHSDDSPLMLLMCVLVSRQL
SRQHPCLDLSALMLGNPMGTRQAQLRILADYPALLGAVANLDAVGSPDENKPLILEGKRL
YLKRYQGFESRVAARLNAMAGTELSTHAHTAALLEALFPVGKEAIDWQKIAVATAAGKQL
TVITGGPGTGKTTTVTKLLLLLSLSSSLNIRMVAPTGKAAARLSESIKASKQRLTQELNS
PLISQDAIASLPEDASTLHRLLGFQPGNHKFRHHRDNPLDLDLLLVDEASMVDLPMMDRL
LDALPGHARLILLGDQDQLASVEAGAVLADICEGARQGYRYSAVQTARIEGLTGTKLAPR
ADAPGLGDNLCRLLHSHRFAEDAGIGQLAMAVNEGDKEKVAAVWQKNYAELSWIPGDNSD
GLAALVQLAKSAYSEYLQAMKQQAEPKTILQKYNEFRVLCAMKNGEYGVDGINRAITAAL
ARAGLIEPSQEFYAGRPVMIQSNDYSLGLFNGDIGILLPVEGDNQRLMTHFIQSDGQVLK
VLPARLPGHETCYAMTVHKSQGSEFASVALSLPPQPTPSQQSLIGRELIYTAITRAKSKF
TCLGTEALFEAATQRRTERASGLADRLWHED
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgatagaactttcaggcaagccctgtagcagtgatgccctcaaagcgcagctcaaactg
tggcaatcacagggagagctgtcggcactggatcgccactttgccctgcagatggccgag
cttcacagtgacgattcaccgttgatgctgctgatgtgcgtgttggtgtcacggcagctt
tcccgtcagcatccctgtcttgacttaagcgcattgatgcttggcaacccaatgggcacc
cgtcaggcgcagctgcgcattctggctgattaccctgcactgttgggtgccgttgccaat
ctcgatgccgttggcagcccggatgaaaacaagccactgattttagaaggcaaacgtctc
taccttaagcgctatcaaggctttgagagccgggtcgcggcgcggcttaatgccatggct
ggaactgagctcagtactcatgcccacacggcggcgctgctggaggcgctgttcccggta
ggcaaagaggctatcgactggcaaaaaatcgcggtggccaccgccgcaggaaagcagctg
actgtcatcaccggcggccccggcacgggtaaaaccaccacggtgaccaagttactgctg
ctcttgtcgctgtcatcctcattgaatattcgcatggtggcgcccacgggcaaggccgct
gccagactgtcggagtccatcaaagccagtaagcagcgactgactcaggagttaaactcg
ccccttatctcccaggacgccattgcaagcctgccggaagatgcctcgacccttcaccgt
ctgcttggctttcaacctggcaaccacaaatttcgccatcacagagacaatccgctggat
ttggacttattgctggtggatgaggcctccatggtggatttacccatgatggacaggctg
cttgatgccctgccaggccatgcccggctcattttgctgggcgatcaggatcagctcgct
tcagtggaagccggtgcagtgcttgctgatatttgtgaaggcgcgcgccagggttaccgc
tacagcgcggtacaaaccgcacgcatcgaggggctcacaggcacaaagcttgccccacgc
gcagacgcccccgggcttggcgataacctgtgccgactgctgcatagccacagatttgcc
gaagacgccggtattgggcagctcgccatggcggtaaatgaaggcgacaaagagaaagtc
gctgctgtgtggcaaaaaaactacgcagagctgagctggatcccgggtgataacagtgat
gggctcgcagccttggtgcaactggccaaatccgcctacagcgagtatttacaggcgatg
aaacagcaggccgagcctaaaaccatactgcaaaagtacaatgaatttcgggtactctgc
gccatgaaaaacggcgagtatggcgtggatggtatcaatagggccattaccgcagccctt
gccagagccggactgatagagccaagccaggagttttatgcaggccgcccggtcatgatc
cagagtaacgattacagtctggggctctttaatggcgacattggcatactgcttccggta
gagggggataaccagcgcctgatgacccattttattcaaagcgatggccaggtgcttaaa
gtcctgccggcgagactaccgggacacgagacctgctacgccatgacagtgcacaagagc
cagggcagtgaatttgcctcggtggcactatccttaccgccacagccaaccccatcccaa
cagagcttgattggccgagagctgatttacaccgccattacccgggccaagtcgaagttt
acctgccttgggacagaggctttgtttgaggccgcgacacagcgtcgcaccgagcgggcg
tcggggctggcagaccgcttatggcatgaggattaa
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