KEGG   Shewanella amazonensis: Sama_1902
Entry
Sama_1902         CDS       T00445                                 
Name
(GenBank) Exodeoxyribonuclease V
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
saz  Shewanella amazonensis
Pathway
saz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:saz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Sama_1902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:saz03400]
    Sama_1902
Enzymes [BR:saz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Sama_1902
DNA repair and recombination proteins [BR:saz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Sama_1902
SSDB
Motif
Pfam: AAA_19 AAA_30 Viral_helicase1 UvrD_C_2 SH3_13 Helicase_RecD RecD_N AAA_11 AAA_22 UvrD-helicase SLFN-g3_helicase UvrD_C nSTAND3 AAA_16 AAA_28 Mg_chelatase T2SSE TrwB_AAD_bind AAA_18 Flavi_DEAD NTPase_1 SRP54 ResIII AAA_7
Other DBs
NCBI-ProteinID: ABM00108
UniProt: A1S6V1
LinkDB
Position
2325741..2327636
AA seq 631 aa
MIELSGKPCSSDALKAQLKLWQSQGELSALDRHFALQMAELHSDDSPLMLLMCVLVSRQL
SRQHPCLDLSALMLGNPMGTRQAQLRILADYPALLGAVANLDAVGSPDENKPLILEGKRL
YLKRYQGFESRVAARLNAMAGTELSTHAHTAALLEALFPVGKEAIDWQKIAVATAAGKQL
TVITGGPGTGKTTTVTKLLLLLSLSSSLNIRMVAPTGKAAARLSESIKASKQRLTQELNS
PLISQDAIASLPEDASTLHRLLGFQPGNHKFRHHRDNPLDLDLLLVDEASMVDLPMMDRL
LDALPGHARLILLGDQDQLASVEAGAVLADICEGARQGYRYSAVQTARIEGLTGTKLAPR
ADAPGLGDNLCRLLHSHRFAEDAGIGQLAMAVNEGDKEKVAAVWQKNYAELSWIPGDNSD
GLAALVQLAKSAYSEYLQAMKQQAEPKTILQKYNEFRVLCAMKNGEYGVDGINRAITAAL
ARAGLIEPSQEFYAGRPVMIQSNDYSLGLFNGDIGILLPVEGDNQRLMTHFIQSDGQVLK
VLPARLPGHETCYAMTVHKSQGSEFASVALSLPPQPTPSQQSLIGRELIYTAITRAKSKF
TCLGTEALFEAATQRRTERASGLADRLWHED
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgatagaactttcaggcaagccctgtagcagtgatgccctcaaagcgcagctcaaactg
tggcaatcacagggagagctgtcggcactggatcgccactttgccctgcagatggccgag
cttcacagtgacgattcaccgttgatgctgctgatgtgcgtgttggtgtcacggcagctt
tcccgtcagcatccctgtcttgacttaagcgcattgatgcttggcaacccaatgggcacc
cgtcaggcgcagctgcgcattctggctgattaccctgcactgttgggtgccgttgccaat
ctcgatgccgttggcagcccggatgaaaacaagccactgattttagaaggcaaacgtctc
taccttaagcgctatcaaggctttgagagccgggtcgcggcgcggcttaatgccatggct
ggaactgagctcagtactcatgcccacacggcggcgctgctggaggcgctgttcccggta
ggcaaagaggctatcgactggcaaaaaatcgcggtggccaccgccgcaggaaagcagctg
actgtcatcaccggcggccccggcacgggtaaaaccaccacggtgaccaagttactgctg
ctcttgtcgctgtcatcctcattgaatattcgcatggtggcgcccacgggcaaggccgct
gccagactgtcggagtccatcaaagccagtaagcagcgactgactcaggagttaaactcg
ccccttatctcccaggacgccattgcaagcctgccggaagatgcctcgacccttcaccgt
ctgcttggctttcaacctggcaaccacaaatttcgccatcacagagacaatccgctggat
ttggacttattgctggtggatgaggcctccatggtggatttacccatgatggacaggctg
cttgatgccctgccaggccatgcccggctcattttgctgggcgatcaggatcagctcgct
tcagtggaagccggtgcagtgcttgctgatatttgtgaaggcgcgcgccagggttaccgc
tacagcgcggtacaaaccgcacgcatcgaggggctcacaggcacaaagcttgccccacgc
gcagacgcccccgggcttggcgataacctgtgccgactgctgcatagccacagatttgcc
gaagacgccggtattgggcagctcgccatggcggtaaatgaaggcgacaaagagaaagtc
gctgctgtgtggcaaaaaaactacgcagagctgagctggatcccgggtgataacagtgat
gggctcgcagccttggtgcaactggccaaatccgcctacagcgagtatttacaggcgatg
aaacagcaggccgagcctaaaaccatactgcaaaagtacaatgaatttcgggtactctgc
gccatgaaaaacggcgagtatggcgtggatggtatcaatagggccattaccgcagccctt
gccagagccggactgatagagccaagccaggagttttatgcaggccgcccggtcatgatc
cagagtaacgattacagtctggggctctttaatggcgacattggcatactgcttccggta
gagggggataaccagcgcctgatgacccattttattcaaagcgatggccaggtgcttaaa
gtcctgccggcgagactaccgggacacgagacctgctacgccatgacagtgcacaagagc
cagggcagtgaatttgcctcggtggcactatccttaccgccacagccaaccccatcccaa
cagagcttgattggccgagagctgatttacaccgccattacccgggccaagtcgaagttt
acctgccttgggacagaggctttgtttgaggccgcgacacagcgtcgcaccgagcgggcg
tcggggctggcagaccgcttatggcatgaggattaa

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