Shewanella amazonensis: Sama_1952
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Entry
Sama_1952 CDS
T00445
Name
(GenBank) phenylalanyl-tRNA synthetase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
saz
Shewanella amazonensis
Pathway
saz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sama_1952
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
saz01007
]
Sama_1952
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saz03016
]
Sama_1952
Enzymes [BR:
saz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Sama_1952
Amino acid related enzymes [BR:
saz01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Sama_1952
Transfer RNA biogenesis [BR:
saz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Sama_1952
Prokaryotic type
Sama_1952
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ABM00158
UniProt:
A1S701
LinkDB
All DBs
Position
complement(2378624..2381011)
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AA seq
795 aa
AA seq
DB search
MKFSESWLREWVNPAISREDLSHQITMAGLEVDGVDAVAAGFSGVFVGEVVECGQHPDAD
KLRVTKVNVGGDTLLDIVCGAPNCRLGLKVAVATVGAVLPGDFKIKKAKLRGQPSEGMLC
SYSELGIDIESDGIIELPLDAPIGTDIREYLDLNDAVIDVDLTSNRADCLGMAGLAREVG
VLNRAEVIEPSWTPAVATIGDAIDIQLSAPAACPRYLGRIVRNVNVKAPTPEWMKEKLRR
SGIRSIDPIVDITNYVLIEFGQPMHAFDLAKIDGKIEVRLGKGDEKLTLLDGSEITVPND
TLVIADNSKPLALAGVFGGEFSGVGESTQDILLECAFFAPLAIMGKARKLGLHTDSSHRF
ERGVDPELQHKVMDRATRLVLDICGGEAGTVVEAKSDEHLPKAREILLRRSKLDKILGHH
VPDSDVVEILTRLGFAVTAGEGEWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNKAPM
AHLRMSTHQEADISLKKVRSLLVARGFQEAVTYSFVDPKLQQLVHPGEQAMILPNPISSE
MSAMRLSMFTGLLTAVGYNQARQQGRVRLFETGLRFVPDANAESGVRQQPMLGAVIAGLQ
NEEHWSMESKTVDFFDLKGDLEAIIGLTVSGSEFSFRRATHSALHPGQCAEILRNDRVIG
YIGAVHPSLEKPFGLNGKTIVFELELDALLHAKLPEAQVISKFPANRRDIALVVDESVAA
ADVIKVIRKVGENQLVGVNLFDVYQGKGVEPGKKSLAIALTLQDNTRTLEEKEIAEAVDT
VVSALKSEFNASLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaatcctggcttcgtgaatgggttaatccagccatcagccgtgaagac
ttaagccatcaaatcaccatggcaggcctggaagtggacggcgttgacgcagttgctgcc
ggcttcagcggcgtgtttgtgggcgaagtcgtggaatgtggccaacatcccgatgccgac
aaactgcgtgtgaccaaagtaaacgtgggtggcgataccctgctggatatcgtttgcgga
gcgccaaattgccgtttgggccttaaagtggctgttgccactgtgggcgctgttctgccc
ggcgacttcaaaatcaaaaaagccaagctccgcggtcagccgtccgaaggcatgctgtgt
tcctacagcgagctgggtattgatatcgaaagcgatggcattatcgagttgccgctggat
gcgcctattggcaccgatatccgtgaatacctcgacctgaacgatgcggttatcgacgtt
gacctgacctccaaccgtgccgattgtctgggtatggccggtcttgcccgcgaagtgggc
gtacttaatcgcgccgaagtgatagagccaagctggactccggctgtggctaccattggc
gatgccatcgatattcagctttcagcccccgctgcctgcccaagatacctgggtcgtatc
gtgcgtaacgttaacgtaaaagcgccgacacctgagtggatgaaagaaaagctgcgccgc
agtggcattcgttcaatcgaccctatcgtggatatcaccaactatgtgctgattgaattc
ggccagcctatgcacgcttttgacctcgccaaaattgacggcaagattgaagtccgtctg
ggcaagggtgatgaaaagctgacattgctggatggtagcgaaatcacagtgccaaacgac
actctcgttatcgcagacaacagcaagcccctggcccttgccggtgtgtttggtggggag
ttctccggtgtgggtgaaagcactcaggacatattactcgagtgtgccttctttgctcct
ctggccatcatgggcaaagcccgtaaactgggcctgcacacagactcatcgcaccgcttt
gagcgtggcgttgacccagagctgcagcacaaggtaatggatcgtgctacccgtttggta
ctggatatctgcggcggtgaagccggcactgtggtggaagccaagtccgatgaacatctg
ccaaaagccagagagatcctgctgcgtcgcagcaaactcgacaaaatccttggccaccat
gtacccgacagtgacgtcgttgaaatcctgacccgtctgggctttgccgtgacagcaggc
gagggtgagtggcaggtgaccacggcgacctatcgtttcgatatggccatcgaagaagac
ctgattgaagaagttgcccgtatctacggttacaacaacatccccaacaaggcgcccatg
gcgcatcttaggatgtctacccatcaggaagctgacatcagcctgaagaaagtgcgtagc
ctcttggtcgcccgcggtttccaggaggccgtgacatacagcttcgtggaccccaaattg
cagcaattggtgcatccaggcgagcaggcgatgatcctgcctaacccgatttccagtgaa
atgtcagccatgcgcctgtccatgttcaccggtttgctcaccgcggttggctacaatcag
gctcgccagcagggacgtgtgcgcctgtttgagacaggattgcgctttgtgcctgatgcc
aatgcagaatccggcgtaaggcagcaacctatgcttggtgccgtgattgcaggccttcag
aacgaagaacattggtcaatggagagcaaaaccgttgatttcttcgatcttaagggtgat
ttggaggcaattattggcttgacagtttcaggatccgaatttagttttagaagagcgaca
cattcggcgcttcaccctggccaatgtgctgaaattctaaggaatgatcgcgttattggc
tatataggtgccgttcatccaagccttgagaagccatttgggctcaatggtaaaaccatc
gtatttgagctggaactggatgcattgctacatgcgaaattgcccgaagctcaggtgatt
tccaagttccccgctaatcgccgggatattgcattggtcgtagatgaaagcgttgctgcg
gctgatgtgataaaagtgataagaaaagttggcgaaaatcagttggttggcgtaaacttg
ttcgatgtataccagggtaaaggtgttgagcccggtaaaaagagcctggcaattgcactg
acgttacaagacaacactcgcacacttgaagaaaaagagatcgcagaagcagtagacact
gtggtttcagcactcaagtccgagttcaacgcatcgttgagggattaa
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