Shewanella amazonensis: Sama_2897
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Entry
Sama_2897 CDS
T00445
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
saz
Shewanella amazonensis
Pathway
saz00061
Fatty acid biosynthesis
saz00071
Fatty acid degradation
saz01100
Metabolic pathways
saz01212
Fatty acid metabolism
saz02024
Quorum sensing
Module
saz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sama_2897
00071 Fatty acid degradation
Sama_2897
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sama_2897
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
saz01004
]
Sama_2897
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saz04147
]
Sama_2897
Enzymes [BR:
saz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sama_2897
Lipid biosynthesis proteins [BR:
saz01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Sama_2897
Exosome [BR:
saz04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sama_2897
Exosomal proteins of breast cancer cells
Sama_2897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABM01100
UniProt:
A1S9P3
LinkDB
All DBs
Position
3443727..3445322
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AA seq
531 aa
AA seq
DB search
MLNNDNNQLDLNEYASLIDLFTKACKRFGDKPAFACLGKSHSFNEIDKLSTDFAAFLQHH
TQLQPGDKVAIQLPNLTQFVIAAYGVLKAGMVLVNTNPLYTERELIHQFKDSGAKVLVVL
SDLLPTLAKVVAETPIELVISTHALDLVSPQIQPKTGLKNIEFLKALNLGSQESWQPVAA
NHSTLAALQYTGGTTGLSKGAMLSHGNLIANALQCRDRLANVITPGEDIFVAPLPIYHIY
AFLVNLVLFVEQGACSVLIPNPRDIPSLIKTLAKYPFTGFAGLNTLFVALCHQEEFRALD
FSHLKLTISGGTALTEAAAGLWQQTTGCTISEGYGLSETSPVITLNQPGAERLGTIGRPV
LATEVQILDEDETPVPMGQAGELAVRGPQVMSGYWQQAGETERVFSKDGFFKTGDIAIAE
PDGCYRIVDRKKDMIIVSGFNVYPNEVENVLASHPAVLECAVIGVADERSGEAVKAVIVL
KPSVEADDARAAITAHCQANLAGYKQPRHIEFVASLPKSTVGKILRRALRS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataacgataataatcagctggatttaaacgaatacgcctcattgattgatttg
ttcaccaaggcctgtaagcgctttggcgacaagccggcttttgcatgtttaggcaaaagc
cacagtttcaatgagatagacaaactgtcgacggattttgcggcatttttgcaacatcac
acccaattgcaaccgggggacaaggtcgccattcaactgcccaacctcactcagtttgtc
attgctgcttatggcgtgctcaaggccggcatggtgctggtaaacaccaatccgctgtac
acagagcgtgagcttattcatcagtttaaagactcaggggcgaaggtgttggtggtgctt
tccgatctgctgccgactctggccaaggtggtggctgaaaccccgatagagctggtgata
tccacccatgcgctggatttggtcagcccacagatacagcccaaaaccggactgaagaac
atcgagtttctcaaagccctgaaccttggcagtcaggaaagctggcaaccggttgccgcc
aaccacagcacgctggcggcattgcagtacacgggcggcaccacagggctctccaagggt
gccatgctcagccacggcaacctgatagccaacgcccttcaatgccgcgatcgcctggcc
aatgtcattacccccggggaagacatttttgttgcccccctgcccatctaccatatctat
gcgttcctggtgaatctggtgctttttgtcgaacagggcgcctgctcggtactcatcccc
aatcccagagatattccgtcgctgataaaaaccctggcgaagtatcccttcaccggattt
gccgggctcaacaccctgtttgtggccctgtgccatcaggaagaattccgcgcactcgat
ttcagccatctgaaactcaccatttccggtggcacggctctgaccgaagccgcagcgggt
ctgtggcagcaaaccaccggctgcaccatcagcgaaggctatggattatcggaaacctca
ccggtgatcaccttaaaccagcccggtgcagaacggctgggcaccataggtcggccggtg
ctggccactgaagtgcagattctggacgaagatgaaaccccggttcccatggggcaagcg
ggtgaactggcggtgcgcggaccacaggtgatgtccggctattggcagcaagccggtgaa
accgagcgggtattcagcaaagatggtttcttcaagacaggtgatattgccattgccgag
cccgatggctgttatcgcatcgtagatcgtaaaaaagacatgattattgtctcaggcttt
aatgtgtaccccaatgaggtggagaacgtgttagcgagccaccccgcggtgctggagtgt
gctgtcatcggcgtcgccgatgagcgcagcggcgaagcggtaaaagccgttatcgtgctc
aaaccatcggtagaagcagatgacgccagagccgccatcacagcccactgccaggccaat
cttgccggctacaagcagcccaggcacatcgagtttgtggcatcactgccaaaaagcaca
gtaggcaaaatattgcgccgcgccctcagaagctga
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