Sphingobium baderi: ATN00_05985
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Entry
ATN00_05985 CDS
T04194
Name
(GenBank) SAM-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbd03009
]
ATN00_05985
Enzymes [BR:
sbd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
ATN00_05985
Ribosome biogenesis [BR:
sbd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ATN00_05985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
Cons_hypoth95
Methyltransf_25
tRNA_U5-meth_tr
Methyltransf_15
Methyltransf_11
Methyltransf_31
MTS
UPF0020
Motif
Other DBs
NCBI-ProteinID:
ALR19927
UniProt:
A0A0S3EX18
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Position
1213658..1214527
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AA seq
289 aa
AA seq
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MELHTLVGEPWADYGLIDSGHGRKLERYGRFRFIRPEPQAMWAPATDDWRADGEFVPGSD
EEGGGRWYYERPVPAEGWPLTWNEVTFQSSCTPFRHLGFFPDMAPVWDWMRERTADKAEA
DVMNLFGYTGVGTLAMAAAGAKMVHVDASKKSVAQARSNAALSGLDDRPVRWIVDDAAKF
VAREVRRGRRYDGILLDPPKYGRGPDGEVWRLEEDLPGLIAHCRQLLDADSRFLFLTVYA
VRMSALAIGELLKQAFADLPGTVEAGELAVREETRGLLLPTAIWARWSR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
ttggaactccacacactcgttggcgagccgtgggccgattatgggctgatcgattcgggc
catggccgcaagctcgaacgctatggccgttttcgcttcatccgtcctgagccgcaggcg
atgtgggcgcccgcgaccgacgactggcgcgccgatggagagttcgttcccggctctgac
gaggaaggcggcgggcgctggtattatgagcgtccggtgcctgccgaagggtggccgctc
acatggaatgaggtgacgttccagtccagttgcacgcccttccgccacctgggcttcttt
cccgacatggcgccggtgtgggactggatgcgcgagcggacggcggacaaggccgaagcc
gatgtcatgaacctgttcggctatactggcgtgggcacgctggccatggcggcggcgggc
gcgaagatggtgcatgtcgacgcttccaagaaatccgtggcgcaggcgcggtccaatgcg
gcgctttccgggctggatgaccgccccgtccgctggatcgtggacgatgccgccaaattc
gtggcgcgcgaggtgcggcgtgggcggcgctatgacggcatattgctcgacccgcccaaa
tatgggcgcggtcccgatggcgaagtgtggcggctggaggaagatctgcccggcctgatc
gcccattgccggcagttactggatgccgacagccgctttctgttcctgaccgtttatgcc
gtgcggatgtcggcgctggcgatcggggaactcctgaaacaggcctttgccgatctgccc
ggcacggtcgaagcgggcgaactggccgtgcgggaggaaacgcgcggcctgctgctgccg
acggccatctgggcgcgctggagccgctga
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