Fluviispira sanaruensis: JCM31447_24200
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Entry
JCM31447_24200 CDS
T05949
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
sbf
Fluviispira sanaruensis
Pathway
sbf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JCM31447_24200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbf03021
]
JCM31447_24200
Transcription machinery [BR:
sbf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JCM31447_24200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
BBH53967
UniProt:
A0A4V0P2P7
LinkDB
All DBs
Position
complement(2814668..2817352)
Genome browser
AA seq
894 aa
AA seq
DB search
MTNSKSKSAVIGSQKRASEHTQSKEKTMNAKPAPQAKKVEKTPAKAQPQAKSAEPSKTVK
KENQPLTKKQSVKSSEHVSKDSPEAAQEVKKTPAVKSEKDLKHHVVKPQKEPKEAEKLGE
KSSPFKLEKSGKVSDKETSKVPSAAKKSVKLTSPVASAAKGKEEPQAASVPAANVAKGKD
EQTASLAAPKQVKIVRAKAEGAGGKTTAAKAASPAKRAVEKSHEYSATEKAQTAEASVAK
KSPARKSPAAKIVESAKPADSLKNLDSSKDKKAKPSADKVVLIKKEAKAAVPAVQEIEEK
DKKTASASASPAAAANAKKKDAKPDLTKKPTKQAKGKGADSEEEDSFDEAAVDEEIDDFT
LDEEEDLLAEVDSESEDPTALPEDDFLAAEEFGADLGGEEEDLDAAGRSNDPVRVYLRKM
GQVALLSRDGEVEIAKKIENEENKLLEHLVSLRIGINHMCDVGQKFIDGIIKAKNLVKGF
DDEQDQANDEGQSQRVRVLVESFMKLANTAVEIEDKFGLQGLDKLSNHEREILNESRSQM
FEIIKEINVNRRIIQQIVTELDTHAKSVSDCMKEINKVKVRTRLDEARLAAYCNNNASRP
IEVNFLTERDWENFKNTYISAQNAILSSEQACFLSRSEIAIKYQVINNANRFAEEAKREL
IEANLRLVVSIAKKYMNRGLQFLDLIQEGNIGLMKAVEKFEYRRGYKFSTYATWWIRQAI
TRAIADQARTIRIPVHMIETINKMVRTSRQLVQEMGREPTPEEIAQRMDMSIEKVRKVMK
IAREPISLEAPIGEEEDNHYGDFLEDKTHGAPIDIVANQSLSDQTKKVLATLTSREEKVL
RMRFGIGEKTDHTLEEVGQSFDVTRERIRQIEAKALRKLRHPSRSKKLKAFIES
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgacgaattccaagtcaaagtcagcagtcattggtagtcagaaacgtgcttctgagcat
acccaaagcaaagaaaaaactatgaacgcaaagcctgcaccacaggcaaaaaaagtagaa
aagactcctgcgaaagctcagcctcaagcaaagtctgcggaaccatctaagacagtaaaa
aaagagaatcagcctttgactaaaaaacaatctgtaaaatcatctgaacatgtttctaaa
gactcaccagaggctgctcaggaagtaaaaaaaactcctgcagtcaaatctgaaaaagat
ttgaaacatcatgtcgttaaaccccaaaaagagcctaaagaggcagaaaaacttggggag
aaatcaagtccttttaagttagagaaaagtggaaaagtgagtgataaagaaacgagcaaa
gtcccgtctgcggcaaaaaaatcagttaaactaacctctccagtcgcttcagcagcaaaa
gggaaagaagagccccaagctgcatccgttcctgctgccaatgtggcaaaaggcaaggat
gagcaaacagcgtccctagcagcgcctaaacaagtcaaaatagtgcgggcaaaagcagag
ggtgccggcgggaaaacaactgctgcaaaagcagcaagcccagcgaaaagggccgttgaa
aagtctcatgaatactcggcaactgaaaaagcacaaaccgcagaagcaagcgtggctaaa
aaaagccctgcgcgaaaatctcctgctgctaaaattgtagaatcagctaagcctgcagat
tctttaaagaacctggactctagcaaagataaaaaggcaaaaccgtctgcagataaagtt
gttttgatcaaaaaagaagctaaggctgcagttcctgctgtgcaagaaatcgaagaaaaa
gacaaaaaaacagcgtctgccagtgcatctcccgctgcagctgcaaatgccaaaaagaaa
gatgcaaaaccagatctcaccaaaaagcctacaaagcaagcaaaaggcaaaggagcagat
tccgaagaggaagattctttcgatgaagcagctgttgatgaagaaatagatgactttacc
ctagatgaggaagaagatcttctcgcagaagtcgactccgaatccgaagacccaactgca
ttgccagaagatgacttcttagcagcggaagagtttggcgctgaccttggtggtgaagaa
gaagatctcgatgccgcgggccgtagcaatgaccccgtgcgtgtctatcttagaaaaatg
ggtcaagtggcccttctttctcgcgatggcgaagttgaaattgctaagaaaattgaaaat
gaagaaaataagctgctcgagcatttggtttcattgcgcataggtatcaaccatatgtgc
gatgtggggcagaaatttatcgacggtattatcaaagccaaaaacctggttaaaggtttt
gatgatgagcaagatcaagccaacgacgaaggtcaatcgcaacgcgtgcgcgtccttgtc
gaaagctttatgaagcttgcgaacacagctgtggaaattgaagataaatttggcttacag
gggcttgataaactttctaaccatgaacgtgaaattctcaatgaatcacgcagtcagatg
tttgaaattatcaaggaaatcaacgtaaatcgtcgtattattcagcagatcgtaacagag
ctcgatacgcatgcaaagtctgtctctgactgcatgaaagaaatcaataaagttaaagtg
agaacgcgcctcgatgaagctcgtttggccgcttattgtaacaacaacgcttctcgacct
atcgaagtgaatttcttgactgaaagagattgggaaaactttaaaaacacttatatctct
gcgcaaaacgcaattttatccagtgaacaagcatgtttcttaagcagaagtgaaattgcg
ataaagtaccaagtgatcaacaatgcaaatcgctttgcggaagaagcaaaacgtgagctg
attgaagcaaacttgcgccttgttgtttcgattgctaaaaaatacatgaaccgtggactt
cagtttctcgatcttattcaggaaggtaatattggcctgatgaaagcagtcgaaaaattt
gaataccgtcgtggttacaaattcagtacgtatgcaacgtggtggattcgccaagcaata
acacgtgcgattgcagaccaagcacgcacgatccgtattcctgtgcatatgattgaaact
attaacaaaatggtaaggactagccgtcagcttgttcaggaaatgggacgagaacccact
cccgaagaaattgcacaacgcatggacatgagtatagaaaaagtacgtaaggtgatgaag
attgcccgcgaacctatttctctcgaagctcctattggcgaagaagaagacaatcactac
ggagactttttggaagacaaaacccatggtgcgcctatcgatatcgtggcaaaccaaagt
ctttccgaccaaaccaaaaaagtcttggcgactttaacttctcgtgaagaaaaagtattg
cgcatgcgttttgggatcggtgaaaagacagaccacacactcgaagaagtggggcaaagt
ttcgacgtaacgcgcgagcgtattcgtcagattgaggccaaggctttgagaaagctacgt
catccaagtcgttctaaaaagttaaaagcttttatagaaagctaa
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