Streptomyces bingchenggensis: SBI_03307
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Entry
SBI_03307 CDS
T01678
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
sbh
Streptomyces bingchenggensis
Pathway
sbh03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SBI_03307 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbh03032
]
SBI_03307 (rnhB)
Enzymes [BR:
sbh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
SBI_03307 (rnhB)
DNA replication proteins [BR:
sbh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
SBI_03307 (rnhB)
Elongation factors (archaeal)
SBI_03307 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
TNRC6-PABC_bdg
Motif
Other DBs
NCBI-ProteinID:
ADI06428
UniProt:
D7CA71
LinkDB
All DBs
Position
complement(4299596..4300327)
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AA seq
243 aa
AA seq
DB search
MPGRRNLVLAMVYEPPTHRVERSLRATTGAKIVVGIDEVGRGAWAGPVTVCAAVTGLRRP
PAGLTDSKLLSPKKRTALAQELETWVTSYALGHASPEEIDALGMTAALRLAATRALDGLP
VRPDAVILDGKHDYLGKPWKVRTVIKGDQSCVAVAAASVIAKVRRDTLMAELGAAHADFR
FGDNAGYPSPAHRAALTELGPTPYHRLSWAYLDGLPRWRHLKRVRSVPGPADAEDSGQLG
FDF
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgggcggcgtaatctggtcctcgccatggtctacgaaccgcccactcaccgcgtc
gagcgctcgctccgcgccaccacaggagccaagatcgtcgtcgggatcgacgaggtcggg
cgcggggcctgggccggtccggtgacggtctgcgcggcggtcaccgggctgcggcgaccg
ccggccgggctcaccgactccaagctgctgagccccaagaagcgcacggcgctcgcccag
gagttggagacgtgggtcacctcatacgcccttggccatgcctcccccgaggagatcgac
gctctggggatgacggcggccctccggctcgccgccacccgcgccctcgacggactgccc
gtgcgccccgacgcggtgatactcgacgggaagcatgactacctgggcaagccctggaag
gtccgtacggtcatcaagggcgaccagtcctgcgtggccgtcgccgcggcctcggtgatc
gccaaggtccggcgggatacgctgatggccgaactgggagccgcccacgcggacttccgc
ttcggcgacaacgcggggtatccgtcgcccgcgcaccgcgctgcgctgacggagctgggt
cccaccccctaccaccggctgtcctgggcctatctggacggattgccccgctggcggcac
ctcaagcgggtccgcagcgtccctggaccagccgatgcggaggattccggtcaactcggc
ttcgacttctga
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