Sorghum bicolor (sorghum): 110431390
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Entry
110431390 CDS
T01086
Name
(RefSeq) 26S protease regulatory subunit 6B homolog
KO
K03063
26S proteasome regulatory subunit T3
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110431390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sbi03051
]
110431390
Proteasome [BR:
sbi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
110431390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_16
AAA_2
AAA_22
DUF815
nSTAND3
RuvB_N
AAA_28
TIP49
RNA_helicase
AAA_18
Mg_chelatase
AAA_14
Sigma54_activat
IstB_IS21
Parvo_NS1
TsaE
AAA_24
AAA_7
AAA_30
DUF5906
AAA_25
NACHT
NTPase_1
AAA_3
DUF3450
AAA_11
NB-ARC
AAA_33
ATPase
DUF6570
AAA_17
AAA_19
Motif
Other DBs
NCBI-GeneID:
110431390
NCBI-ProteinID:
XP_021306158
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All DBs
Position
1:complement(73486142..73492633)
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AA seq
420 aa
AA seq
DB search
MSAAPTGPAPPVATPMAPPPSYPASSTISASVAASVEEEDDLYGRLKSLQRHMEFVEIQE
EYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDGNNGIVGSTTGSNYYVRILST
INRELLKPSASVALHRHSNALVDVLPPEADSSISLLGSSEKPNVTYNDIGGCDIQKQEIR
EAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQK
YLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDG
FDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLSDEV
DLEDYVSRPDKISAADIAAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPETDFDFYK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgccccaaccggcccagcccctccggtggccactccgatggcgccccctccg
tcctacccggcctcctccacgatctccgcctccgtcgccgcgtccgtcgaggaggaggac
gacctctatggccgcctcaagtcgctccagcgccacatggagttcgtcgagatccaggag
gagtacgttaaggacgagcagaagaacctcaagcgcgaactcctccgtgcgcaggaggag
gtcaagcggatccagtccgtaccgctcgtcatcggccagtttatggagatggtcgacggc
aacaacggcatcgtgggctctaccacgggcagcaactactacgtgcggatcctcagcacc
atcaaccgcgagctgctcaagccgtcagcgtccgtcgcgttgcatcgtcactccaacgct
ctagtcgacgtgctgccacccgaggccgactccagcatctccttgctggggtcgtcggag
aagcccaacgtcacctataacgatattggaggatgcgacatccaaaagcaagaaatacgg
gaggcggttgagttacccttgactcatcatgagctgtacaagcagattggtattgatcct
ccaagaggtgtgcttctgtatggtcctccaggtactggaaagaccatgcttgccaaagca
gtcgcacatcacacgactgctgcttttatcagagtcgtgggttcagagtttgtacagaag
tacttgggtgagggccctagaatggtgcgtgatgtgttccgcttggctaaggagaatgct
ccagcaatcattttcattgatgaggttgatgctatagccactgctcgtttcgatgctcag
actggtgctgaccgagaagttcagcgtattcttatggagctactcaatcagatggatggg
tttgatcaaacagtgaatgtgaaggttataatggcaactaatcgggcagacactctagat
cctgctctgttgcgtcctggtagacttgacaggaaaattgagttccctctgccagaccgg
cgtcagaagaggcttgtttttcaagtttgcactgccaaaatgaacttgagcgatgaggtt
gatttggaagattatgtttccagaccggataagatcagtgctgctgatattgctgctata
tgtcaagaagctggcatgcatgctgtccgtaagaaccgatatgtcatcctccccaaggac
tttgagaagggctaccgaaccaatgtgaagaagccggagacagatttcgatttctacaaa
tga
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