Sorghum bicolor (sorghum): 8067641
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Entry
8067641 CDS
T01086
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00040
Pentose and glucuronate interconversions
sbi01100
Metabolic pathways
Module
sbi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8067641
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
8067641
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
DUF2283
NosD
Motif
Other DBs
NCBI-GeneID:
8067641
NCBI-ProteinID:
XP_002437275
UniProt:
A0A921U1F1
C5Z5S8
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Position
10:53118823..53120355
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AA seq
410 aa
AA seq
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MACTGNAMRAFFLLAFVCAAHAGKDAPAKDGDAKAASGPGGSFDISKLGASGDGKKDSTK
AVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATTDLSQYKGN
WIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGITLL
NAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGP
GTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASV
LTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAV
SLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcacaggcaatgcgatgagagccttcttcctcctggcgttcgtctgcgccgcg
catgctgggaaggacgctcctgccaaggacggcgatgcgaaagcggcgtccgggcctggc
gggtcgttcgacatcagcaagttgggcgcctccggcgacggcaagaaggacagcacgaag
gctgtgcaggaggcatggacgtcggcgtgcggcggcaccgggaagcagacgatcctcatc
cctaagggcgactacctcgtcggaccactcaacttcaccggcccgtgcaagggcgacgtg
accatccaggtggacggcaatctgctggcgaccacggacctgagccagtacaagggtaac
tggatcgagatcctgcgtgtggacaacctggtgatcaccggcaaggggaagctcgacggg
cagggccccgccgtgtggagcaagaactcgtgcgccaagaagtacgactgcaagatcctg
cccaactcgctggtgctggactacgtgaacaacggggaggtgtccgggatcacgctgcta
aacgccaagttcttccacatgaacgtgttccagtgcaaggacatgttgattaaggatgtg
acggtcacggcgcccggggacagccccaacacggacggcatccacatgggcgactcgtcc
ggggtcaccatcgagaacaccgtcatcggcgtcggcgacgactgcatctccatcggcccc
gggacaaccaaggtgaacatcaccggcgtcacatgcggccccggccatggcatcagcatc
ggcagcctggggcggtacaaggacgagaaggacgtcacggacatcaacgtgaaggactgt
acgctgaagaagacgagcaacggcctccggatcaaggcgtacgaggacgccgcctccgtg
ctcaccgcctccaagatccactatgagaacatcaagatggaggactcgtcgaaccccatt
atcatcgacatgaagtactgccctaacaaaatctgcaccgccagcggcgcctccaaggtc
accgtcaaggacgtctccttcaagaacgtcaccggcacctccgccagccccgaggccgtc
agcctgctctgctccgacaagatcccctgcactggcgtcaccatggataacgtcaaggtc
gaatacagtggcaaaaacaacaagaccatggccgtatgccaaaacgccaagggcagcgcc
acaggctgcctcaaggagctcgcatgcttctag
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