Sorghum bicolor (sorghum): 8073709
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Entry
8073709 CDS
T01086
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
8073709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8073709
Enzymes [BR:
sbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
8073709
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
8073709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
zinc_ribbon_12
Motif
Other DBs
NCBI-GeneID:
8073709
NCBI-ProteinID:
XP_002446717
UniProt:
C5YBD9
A0A921QSJ8
LinkDB
All DBs
Position
6:49548810..49561803
Genome browser
AA seq
1391 aa
AA seq
DB search
MAKPEEKLRCTKEPFIEDVGTRRIKSIRFSVLSGSEIRKSAEVQVWNNRIYGHDMKPVPN
GLLDPRMGVPNKREKCSTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS
RVLLFEKDRREFLKKMRNPRADALQKSATMKKVRDKCKLSCCPRCDYRNGVVKKGRAGLI
VVHDCSKVLDGHTEELKNALQNKKEKVSANSVRVLDPATVLSLFRRMTDEDCELLNLGDR
PEKLIVSEIAVPPVPIRPSVVVGSSRTSNEDSITVILKSIVNTNSILKETLHTGGPFTKC
FDCWQYLQLQVVEYVNSDAPCLPDSQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISP
DPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQSL
KYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESV
CNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLV
TRKDTFYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNAHTRVFL
NLAVQEKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSELLSGQVGKATLGNGNKDG
LYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKEIDGGYK
KCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSPLIMSQ
CGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAKGFVANSFYTGL
TATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLY
GDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQMLEDKLLQHDTSSD
GGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAAIISGISAKQLQ
VFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKE
IINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLKSSQPNLIVKL
DMQLIESLHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGTDKRKLQLELHN
LKSILPKVIVKGIPTVERVVIDEVKVKNETERYQLLVEGTNLLAVMGTPGVDATKTKSNH
IMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEILGITRYGIAK
MKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHVP
EFKYQPDPILS
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccggaggagaagctgcgctgcacgaaggagcccttcatcgaggacgtcggc
acccggaggataaagagcatccggttcagcgtgctctcgggcagcgagattcgcaagtct
gcggaggtgcaggtctggaacaacaggatctatgggcacgacatgaagccggtgcccaat
gggttgctcgacccgcgaatgggagtccctaataagagagagaaatgcagtacctgccat
ggtgaatttagtgactgtcctggccatttcggctacttgaagcttgcgcttccagttttt
aatgtaggcttctttaactgtattctggacgtgttgaagtgcatctgcaagagctgtagc
agagttcttctttttgagaaagaccgcagggagtttctgaagaagatgagaaatcccagg
gcagatgcactacagaaaagtgctacaatgaaaaaagtgagggacaaatgcaaactatcc
tgctgcccccgctgtgattacagaaatggtgtagttaaaaaaggcagagcaggcttgata
gtggttcatgactgtagcaaggttttggatggacatacagaagaactaaagaatgcattg
caaaacaagaaagaaaaggtctccgctaattcagttcgtgtgttagaccctgcaactgtt
ctctctctattcagaagaatgacagacgaggattgtgaattactaaaccttggtgatagg
ccagagaaacttattgtgtcggagattgcagtgccacctgttcctatacggccttctgtc
gttgttggtagtagtagaacaagcaatgaagacagcatcacggttattttgaagagcatt
gttaatacaaactccatccttaaggagaccctccatactgggggtccattcaccaagtgc
tttgattgctggcaataccttcaacttcaagttgttgaatatgtgaatagtgatgccccc
tgtcttccagactcacaacatcgtggccttgttcaacgactcaaagggaagactggccga
tttcgtggtaatttgtctggaaaacgtactgagtatacaggaagaactgtcatatctcct
gatccaaatttgaaaataacagaggtggctattcctgtgttgatggctcgagtcttgact
tatcctgaaagggtttcaaactataacattgagaagctgagacaatgtatacgaaatgga
ccattcaaatatccaggggctaattttgttacacaacctgatggcatgaagcagagctta
aagtatggcgatagaaggattactgctcgggatttaaagtgtggatgtatagttgaaagg
catttagaagatggagacgtggtcctctttaatagacagccgagtctgcatagaatgtca
attatgtctcacagggcaaggataatgccatggagaacactcagatttaatgagtctgtt
tgcaacccttataatgctgattttgatggagatgaaatgaatttgcatgtccctcagaca
gaggaagctcgcactgaagcgcttatgctcatgggggttcagaataatttatgtactcct
aagaatggtgagatactagttgcttccacgcaagacttcttgacctcatctttcctagtt
acaagaaaagatactttctatgatagatcttcatttactcttttgtgctcataccttggt
gatgcaatggagaacattgatttgccaacaccagccttgattaaacctattgagctttgg
actggtaaacagctatttagcgtgttagtccgacctaatgcacatacaagggtttttctg
aatcttgctgttcaagaaaaaatttattcaaagaaaaaggggaaaaaagaggcgggagag
gaaacaatgtgtggaagggaaacaatgtgtcccaatgatggttatgtctacttccgaaac
agtgaactgttatctggacaagtagggaaggccactttaggtaatgggaataaggatggc
ctttactctgttcttttaagagattataattctcatgctgcagcaagctgtatgaatcgc
ttggcaaaatttagtgcaagatttatagggaaccatggtttttccattggtgtggatgat
gtccaaccaggagaacatctaaaccggcaaaagaaaaaggaaatagacggagggtacaaa
aaatgccatgatcttatttctttgttcgcgaaaggtgcgctcgcattacatcctggatgc
aacgcagctcaaacattggagcataacatcactggcgtgttaaatgaaatcagatcaatt
gctggaaatgtgtgcatggatacgcttcactggaggaacagcccattgatcatgtctcag
tgtggttctaaaggttctccaatcaatatcagtcagatggttgcgtgtgttggacagcaa
tcagttggagggcgtcgcgccccagatggttttttaaatagaactcttcctcactttcct
ataaattctaagacccccgcggctaaaggttttgttgctaattcattctatactggtttg
actgctactgagtttttcttccacacaatgggtggacgagaaggtcttgttgacacggcg
gtcaaaacagcagaaactggatatatgtcccgcagattgatgaagggcttggaagatctc
tcggttttctatgatcagacagttcgaaatgctagcggtggtatagttcaatttttgtat
ggagatgatggcatggatcctgcaaagatggaaggaaaagatggcatgcccttaaatttg
gatcaattgtttatgaaagtcatggccacatgtcctcaaaggggatcagatacattatct
ccagaggctatcaaacagatgttagaggataagctcttgcagcatgacacctcatctgat
ggtggctgtagcgaagagttcaagaaaaacttaactgaatttcttgataaacgtatagaa
ttaatgaaatgcacaagaagggcactccatctacatgaggatcatgtagaaaagaaagat
tcttgcgtagaagaatctgttgctgctattatatctggtatatctgcaaaacaacttcag
gttttcttggacacttgcttatctcgttatcagtcaaagaagattgaagcaggagcatct
attggagcaattggagctcaaagtattggagagccagggactcagatgacactgaaaaca
tttcattttgccggagtagctagcatgaatgttactcttggtgttcctcgaatcaaggaa
attatcaatgctgctagaaagataagcacgcctattatcaccgctcagcttttgtcaaag
aaagatgtgctttctgcgcgtattgtgaaaggatctatggagaaagcagtgctcggcgag
gttgcagtcgctatacagattgtcctgaagtcaagtcagccaaacttgattgtcaaactt
gatatgcaacttatagaaagtctccacatgggaatatctgctgattctgtgcagctgtca
attttgaatcatccaaagattaagctaaaatctgagcatgtccgtgtcattgatagagcc
aagttgagaatatatccagctggaactgataagcgcaaacttcagcttgaactgcacaac
ctcaaatccatccttccaaaagtgattgtgaagggcattccaactgttgaaagggttgtt
attgacgaagttaaagtaaaaaacgagacagaaagataccaattgttggttgaaggaaca
aacctcctggcagtcatgggtaccccaggagttgatgctacgaagacaaaaagtaatcat
atcatggaaacgaaccaaacgcttggaattgaagcagctaggagatctattattgatgaa
attcagtacacaatgaaaagtcatggcatgaacattgatcggagacatatgatgctctta
gcagatttaatgacatacaagggtgaaattctcggcattactagatatggcattgcaaag
atgaaaagcagcgtgctgatgcttgcttcatttgagaaaacctcagaacatctattcaat
gcctcatacagtggtcgtgaggatcagatagagggagttagtgaatgcattatcatgggc
attcccatgcagctcggtaccggtattctcaaagttaggcaaaggctcgaccatgtgcct
gaattcaagtaccagccagacccgatactgtcgtga
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