Sorghum bicolor (sorghum): 8085126
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Entry
8085126 CDS
T01086
Name
(RefSeq) 1-deoxy-D-xylulose-5-phosphate synthase 1, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00730
Thiamine metabolism
sbi00900
Terpenoid backbone biosynthesis
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
8085126
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
8085126
Enzymes [BR:
sbi01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
8085126
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Motif
Other DBs
NCBI-GeneID:
8085126
NCBI-ProteinID:
XP_002441088
UniProt:
C5YXS7
A0A921QAF3
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All DBs
Position
9:complement(49054991..49059105)
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AA seq
722 aa
AA seq
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MALWTTFSVPRGFLAVPAHHDSHFASAVEQLHGHKLLQARPLRPRRHHRPACVSASLSPE
REAEYYSQRPPTPLLDTINYPVHMKNLSVKELRQLADELRSDVIFHVSKTGGHLGSSLGV
VELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMPTMRQTNGLAGFTKRAESEYD
SFGTGHSSTTISAALGMAVGRDLKGGKNNVVAVIGDGAMTAGQAYEAMNNAGYLDSDMIV
ILNDNKQVSLPTATLDGPVPPVGALSSALSKLQSSRPLRELREVAKGVTKQIGGSVHELA
AKVDEYARGMISGPGSSLFEELGLYYIGPVDGHNIDDLITILNDVKSTKTTGPVLIHVVT
EKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYTNYFAESLIAEAEQDSKIVAI
HAAMGGGTGLNYFLRRFPSRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRGYDQ
VVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVAYMACLPNMVVMAPSDEAELCHMVA
TAAAIDDRPSCFRYPRGNGIGVPLPPNYKGTPLEVGKGRILMEGDRVALLGYGSAVQYCL
AAASLVERHGLRVTVADARFCKPLDHALIRSLARSHEVIITVEEGSIGGFGSHVAQFMAL
DGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQNREALAIMAVP
NA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtggacgacgttctctgttccaaggggattcctcgccgtgcctgctcaccac
gactcccatttcgcttcggcggtggagcagctccatggccacaagctgctccaggccagg
ccactcaggcctcggcgtcatcatcggccggcatgcgtgtcggcgtcgctgtcgccggag
cgcgaggcggagtactactcgcagcggccgcccacgccgctgctggacaccatcaactac
cccgtccacatgaagaacctgtccgtgaaggagctgcgtcagctcgccgacgagctccgc
tccgacgtcatcttccacgtctccaagaccggcggccacctcgggtccagcctcggcgtc
gtcgagctcaccgtcgcgctgcactacgtcttcaacgcgccgcaggaccgcatcctctgg
gacgtcggccaccagtcgtacccgcacaagatcctgacggggcggcgcgacaagatgccg
acgatgcggcagacgaacgggctggcggggttcacgaagcgcgcggagagcgagtacgac
agcttcgggacgggacacagctcgacgaccatctcggcggcgctggggatggcggtgggg
agggacctcaagggcggaaagaacaacgtggtggcggtgatcggcgacggcgccatgacg
gcggggcaggcgtacgaggccatgaacaacgccgggtacctggactccgacatgatcgtc
atcctcaacgacaacaagcaggtgtcgctgccgacggccacgctcgacgggcccgtgccg
cccgtcggcgcgctcagcagcgccctcagcaagctgcagtccagccgcccgctcagggag
ctcagggaggtggccaagggagtgacgaagcagatcggcggctcggtgcacgagctggcg
gcgaaggtggacgagtacgcccgcggcatgatcagcgggcccggctcctctctcttcgag
gagctcggcctctactacatcggccccgtcgacggccacaacatcgacgacctcatcacc
atcctcaacgacgtcaagagcaccaagaccaccggccccgtcctcatccacgtcgtcacc
gagaagggccgcggctacccctacgccgagcgagccgccgacaagtaccacggcgtcgcc
aagtttgatccggcgacggggaagcagttcaagtccccggccaagacgctgtcctacacc
aactacttcgccgagtctctgatcgcggaggcggagcaggacagcaagatcgtggccatc
cacgccgccatggggggcggcacggggctcaactacttcctccgccgcttcccgagccgg
tgcttcgacgtcgggatcgcggagcagcacgccgtgacgttcgcggccggcctcgcctgc
gagggcctcaagcccttctgcgccatctactcgtcgttcctgcagcgcggctacgaccag
gtcgtgcacgacgtcgacctgcagaagctccccgtcaggttcgccatggacagggccggg
ctcgtcggcgccgacgggcccacccactgcggcgcgttcgacgtcgcctacatggcgtgc
ctgcccaacatggtcgtcatggcaccgtccgacgaggccgagctctgccacatggtcgcc
accgccgccgccatcgacgaccgcccgtcctgcttccggtacccgagaggcaacggcatt
ggcgtcccgttgccgcccaactacaagggcactcccctcgaggtcggcaagggcaggatc
ctgatggagggcgaccgggtggcgctgctggggtacgggtcggcagtgcagtactgcctg
gccgcggcgtcgctggtggagcgccacggcctcagggtcaccgtcgccgacgcgaggttc
tgcaagccgctggaccacgcgctgatcaggagcctggccaggtcccacgaggtgatcatc
accgtcgaggaaggctccatcggaggcttcggctcgcacgtcgcccagttcatggccctg
gacggcctcctcgacggcaaactcaagtggcggccgctggtgcttcctgacaggtacatc
gaccatggatcgccggcagatcagctggccgaggctgggctgacgccgtcgcacatcgcc
gccacggtcttcaacatcctggggcagaacagggaggctcttgccatcatggcagtgccg
aacgcgtag
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