Shewanella bicestrii: CF168_00960
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Entry
CF168_00960 CDS
T05197
Name
(GenBank) biotin--[acetyl-CoA-carboxylase] ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj00780
Biotin metabolism
sbj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
CF168_00960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbj03000
]
CF168_00960
Enzymes [BR:
sbj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
CF168_00960
Transcription factors [BR:
sbj03000
]
Prokaryotic type
Helix-turn-helix
Other families
CF168_00960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HTH_24
Rrf2
HTH_20
HTH_5
Fe_dep_repress
HTH_10
MarR
MarR_2
HTH_28
BPL_LplA_LipB_2
HTH_Crp_2
HTH_36
HTH_1
HTH_DeoR
HTH_34
TrmB
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ASK67535
UniProt:
A0A220UHG1
LinkDB
All DBs
Position
216410..217369
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AA seq
319 aa
AA seq
DB search
MSDNWVRKREILGLLSSEHFVSGEELATQLGISRAAVSKHVDALEDYGVAIYSVKGRGYK
LANPISLIDSARLIQSIDNRCFYFDEIPSTNGFMLSHTGELKSGDLCVAEYQSAGRGRRG
RTWVSPYGHHLYFSQFWSFPQGMAQAMGLSLVVACSLVEVLKSFGVDNIGVKWPNDIYLN
YKKLAGILIEMSGQADSECQLIIGIGVNMAMSEDQGKGIDQPWSDLSALATMPNKTDLVI
ALQKQLKKDIQLFEREGLAAFKMRWQAADLFYGKEIRLLMGENHVEGICRGVDEQGAVLL
ETADGTQAYIGGEISLRPK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataactgggtgagaaaacgcgaaatactgggattactgtcgagcgaacatttt
gtctcgggtgaagagttggcgacacaactgggtatttctcgtgcggcggtgagcaagcat
gtcgatgctttggaagactatggcgtggcaatttacagtgtcaaaggccgtggttataag
ttagcgaaccccatctcccttatcgactcggctcggttaattcagtcgattgataatcgc
tgcttttattttgatgagatcccaagcaccaacggttttatgttaagccatacgggtgag
cttaagagtggcgacctgtgtgtcgcggaataccagtcggcaggacgaggtcgccgtggc
cgtacttgggtttctccctatgggcatcatttatatttctcgcagttttggtcattcccc
caggggatggcgcaggcaatgggcctaagcctagtggtggcttgtagcttagttgaggta
ttgaagtcctttggtgtggataatatcggcgtgaaatggccaaacgatatttaccttaat
tataaaaagcttgcagggattttaattgagatgtcaggtcaggctgacagcgagtgccaa
ttgatcattggtattggcgtcaacatggccatgtcggaagatcaaggtaaaggtatagac
cagccttggagcgatctatccgccttagcgactatgccaaataaaacggatctcgtgatt
gcgctgcaaaagcagcttaagaaagatattcaactatttgaacgcgaaggattagcagca
ttcaaaatgcgttggcaagcggctgatttattctatggcaaagagatccgtctgctcatg
ggtgaaaatcatgttgagggtatttgccgcggcgtcgacgagcagggcgcagtgctactt
gaaaccgccgatggcacacaggcatacatcggcggcgaaattagtttaaggccgaaatag
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