Shewanella bicestrii: CF168_05085
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Entry
CF168_05085 CDS
T05197
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbj03021
]
CF168_05085
Transcription machinery [BR:
sbj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CF168_05085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ASK68296
UniProt:
A0A220UK74
LinkDB
All DBs
Position
1149674..1150276
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AA seq
200 aa
AA seq
DB search
MALAIPQMHAHEHTDEQLMQRYAKGDGKAFEQLYLKHKGALYRYFVRQLGDKQLAEDLYQ
ETWGRVIRAAANYEPSAKFNTWLYRIAHNLLIDHVRAVKPVDLVSHDNEEGLDTFVGAEQ
EQPDVHWQETQKSLLLKTCIALLPQVQKEAFILNIEMGFTAAVISDIAGVTLEATKSRIR
YAYQSLKDCVNAKWQEVGHE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggccttggcgataccgcaaatgcatgcccatgagcataccgatgaacagttaatgcaa
cgctatgccaagggcgatggcaaagcgtttgagcagctttatcttaaacacaaaggcgcc
ttgtaccgttactttgtgcgccaactcggtgacaaacaattagccgaagatttatatcaa
gaaacctggggacgggtgatccgtgccgccgccaattatgagccgagcgccaagtttaat
acttggctctatcggattgcccataatctgttgattgaccacgtcagggcggttaagccg
gttgatctagtcagtcacgataacgaggaagggctagatacttttgtgggagcagaacag
gaacaacccgatgtgcattggcaggaaacgcaaaaaagcttgttgctgaaaacctgtatt
gccctgttaccccaagtgcaaaaagaggcctttattctcaatatcgaaatgggctttacc
gctgcagtgatcagcgatattgcaggggtaacactcgaagcgaccaagagccgcattcgc
tacgcgtatcaaagcttaaaagattgtgtcaatgctaaatggcaggaggttggtcatgag
taa
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