Shewanella bicestrii: CF168_07840
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Entry
CF168_07840 CDS
T05197
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbj03400
]
CF168_07840
DNA repair and recombination proteins [BR:
sbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CF168_07840
Archaeal homologous recombinant proteins
CF168_07840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
Mei5_like
GTP_EFTU
cobW
Motif
Other DBs
NCBI-ProteinID:
ASK68801
UniProt:
A0A220ULF3
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All DBs
Position
1799430..1802486
Genome browser
AA seq
1018 aa
AA seq
DB search
MKPLSLSMSAFGPFASTQTIDFTELGNNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE
REGSQMRCDMADDSVLTEVTFHFQLGSTGYRIRRVPEQERLKKSGDGSTVQKSEAQLYKI
APDGSETLIVASKVSDATAEIEALTGLDVEQFRQVMVLPQGKFRELLMADSKAREQIFSQ
LFQTHIYKRIEDTLKAKAADIRALVKEQRARRDGILQTAALTSDDELAAEFSRIEPEFAA
ATAAKEQSVAAHLAALKQRDSAQQLFAEFTRLEELQAEVLRLNEQQAHIATQTTRLEVAK
QALRVKPLLDNALSREQEASVAAAQRDSAQSTLDAAKLALTHAETAAQEIIPLEHKLREV
EQQHSHLSALVPQLAEFTSLEQALTQAKQILQHTKLQGQESKTALATLVEQRGHCENQLP
ALQSQSELQLATAQALQQHRHMLEQFKQWQQICAKVAHTQGILEQVGSQGKALNTQYQAA
STAYKSLQLTWFQGQAAILARELKPHEPCPVCGSSAHPQPAVSHEDLPTDLQLQAAQDAE
ALALDNLNKARAEYRGLQKQLEAQQQQANELATVLGDKVELSLESHSQTLERLMLQAKQA
DAAAQALQQLQQQIKTLQLQESTLTQQLELERERYREQEGKVERLSGQFAEKALRIPEEY
RTLEVLNQAIANNQQQLEQIKRQIDVLRTAQQQATQQSVAAQTALSAAIERCNTTADLQA
QAQQTLLTALDNAGFIDRDALREALLTDEQMQTLAEGIETYHRQCALNQSQLTQLTTKLS
ESTSPDLDALEALLTERLAQLKTAEEVWSQLNTRLTLLNNTQTQLAVVDQKAKSLEDEYA
VIGTLADVANGNTGNKISLQRFVLSVLLDDVLLAATQRLHLMSKGRYRLLRKEDRAKGNK
ASGLELEVEDAYTSKVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSAGRMIGVISHVSEMKEQIGTRIDILKTSHGSEIKVILP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaagccactctcgctgtcgatgtcggcctttggcccctttgcttcgactcaaactatt
gattttaccgaactggggaataaccccttattcctgatcaacgggccaactggtgcgggc
aaaaccacgctgctcgatggaatttgttttgcactctatggaaaaaccacgggtaacgaa
cgagaaggcagccagatgcgctgcgatatggccgatgatagcgtactgactgaggtaacc
tttcattttcaattaggcagtacgggttatcgtattcgccgtgtccccgagcaggagaga
ttaaagaaaagcggtgatggctcaacggtacaaaagagtgaggcacagctgtataagatt
gccccggatggcagcgaaacccttatcgtcgccagtaaagtgtccgacgccacggcggaa
atcgaggcattaactggcctagatgtggagcagttccgccaagtgatggtgctgccgcag
gggaaatttcgcgaattgctgatggccgattctaaggcgcgtgagcagatttttagccaa
ttattccaaacccatatctataagcgcatcgaagatactctaaaggctaaggcggcggat
attcgtgccttagtgaaagagcagcgcgcccgccgtgacggtattttgcaaacggcagca
ctcacatccgatgatgaacttgccgctgagtttagccgcattgaacccgaattcgcggcg
gcgacggcagcaaaagagcaaagcgttgcggcgcatttagcggcattaaaacagcgtgat
agcgcgcagcaactctttgctgaatttactcgcttagaggaattgcaggctgaggtgctt
cgtcttaatgagcagcaagcgcatattgctacccaaacgacacgacttgaggtggccaag
caagcactgcgggtaaaacccttattagataatgccttgtcgcgggagcaagaagcgagt
gttgcagccgctcagcgcgatagcgcgcagtcgacgctcgatgccgccaagctcgccctc
actcatgcagaaactgcggcgcaggaaattattccccttgaacataagctgcgtgaggtt
gagcagcaacacagtcatctcagtgccttagtgccgcagctggctgagtttaccagcctg
gaacaagctttaacgcaggcaaaacagatactgcaacacaccaagttgcaggggcaggag
agtaaaacagcacttgccaccttagttgagcagcgcggtcattgtgagaatcaactgcct
gccttgcaatcgcaaagtgagctgcaacttgccactgcgcaggcgctgcagcagcaccgt
catatgctcgagcagtttaagcagtggcagcagatctgcgccaaagttgcgcacactcaa
gggattcttgagcaggtcggctcacaaggaaaagcacttaatacccaatatcaagcggcc
tcaacggcttacaagtctttgcagctgacatggtttcaaggtcaggcagccattttagct
agagagttaaaaccccatgagccatgcccagtttgtggcagttcggctcatcctcagccc
gcggtgagtcatgaggatttaccaacggatctacaattgcaggcggcgcaggatgccgag
gccttggcgctcgataatctcaataaagcgcgggcagaatatcgtggactgcaaaagcaa
ttagaagcacagcaacagcaggctaatgagctggcaacagtccttggcgataaggttgag
ttgtcactcgaatcccatagccaaaccttagaaagactcatgctgcaagcgaaacaggcc
gatgctgcggcgcaagcgctgcagcaattacagcaacagatcaaaaccttgcagctgcaa
gagtcgactttgacgcagcaactcgaacttgagcgtgagcgctaccgtgaacaagaaggc
aaagtcgagcggctatcgggtcaatttgcggaaaaagcgctgaggatcccagaagaatac
cgaacactggaggtattgaatcaagcgattgcgaataaccagcagcaactcgaacagata
aagcgtcagattgatgtgctcagaaccgcgcagcagcaggcaacacagcagagtgtcgcg
gcgcaaacggcattatcggcggcaatagagcgttgtaatactacggcagatctgcaggcg
caagcacagcagacactactgacggcgctcgataacgcaggctttattgatagggatgca
ttgcgcgaagccttgttaaccgatgagcaaatgcagacgctggccgagggtatagaaact
tatcacagacagtgcgccttaaatcagtcgcaactgactcagcttacaaccaagttgagc
gagtcgacatcacccgatcttgacgccttagaggccttgctcactgagcgactcgcgcag
cttaaaacggcggaagaggtatggagccaactcaatactcggctcaccctgcttaacaat
acccaaactcagctggcggtggtcgatcaaaaggccaaatccctcgaggatgaatacgct
gtgattggcaccttggccgatgttgccaatggtaatacgggcaacaaaatttccctgcaa
cgctttgtgctcagcgtactgctcgacgatgtgttgcttgcggcaacgcagaggctgcat
ttaatgagtaaagggcgctaccgattattgcgtaaagaggacagggcgaagggcaataag
gcctcaggactagagcttgaagtcgaggatgcctacacctctaaagtgcgtcccgtggcg
accttaagtggcggtgagagttttatggctgccttgtcgatggccttgggcttatcggat
gtggttcaagcttacgcgggcggcataaaactcgataccttatttatcgacgaaggcttt
ggcagcctagatcaggactccctcgaacttgccattcgcacgctgatggatttgcagtcg
gcggggaggatgattggggtgatttcccatgtatccgaaatgaaagaacagataggcact
cgaattgatatcttgaaaacctcccatgggagtgaaatcaaggtgattttgccttag
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