Shewanella bicestrii: CF168_11870
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Entry
CF168_11870 CDS
T05197
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbj03009
]
CF168_11870
Enzymes [BR:
sbj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
CF168_11870
Ribosome biogenesis [BR:
sbj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CF168_11870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
YebU_pre-PUA_dom
Methyltranf_PUA
Methyltransf_31
NSUN5_fdxn-like
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
ASK71284
UniProt:
A0A220USW5
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Position
2734655..2736103
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AA seq
482 aa
AA seq
DB search
MVQLNQNFINTIAQELPAHLSMDDFIAACSRPLRRSIRVNTLKISSEDFKQLMQPKGWTF
EPIPWCEDGFWISYDEEEQLGNALEHIQGLFYIQEASSMLPPAALFTPNADWQCVLDLAS
APGSKTTQMAALMNNQGLLVANEYSASRVKVLHANVLRMGASHCALTHFDGRVFGEYLYE
SFDAVLIDAPCGGEGTVRKDADALKSWSLDEVLEISETQKALIESAFLALKPGGSLVYST
CTLNRHENQGVCEYLQQTYGDAVQFESLSQLFDGAEKATTPEGFLHVWPQIYDSEGFFVA
KLTKTRSVPRLQPEPKLQKNFPFTEASVKQAKAIQAYFADDLGIELPDDLIMVRDDEFWL
FPHEFRDFIGKMRFQRIGVKLADHSKHGFKVRHEAIIALAGKALTAGTANGAKVVDVSDE
QAKEYLMGRDIPLDMAGKAQGEVIVCYGGAPLGMAKHLGNKLKNSLPRDLVKDKVLLLPP
QA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggttcaattaaatcaaaattttatcaatactattgcccaagaactgcccgcccatctc
tcaatggatgactttatcgcggcctgttcaagaccactacgccgctcgattcgcgtcaac
accttaaagatcagcagtgaagactttaagcagttaatgcagcctaagggatggaccttt
gaacccattccttggtgtgaggatggtttctggataagctacgatgaagaagagcagctc
ggcaatgccctagaacatattcagggattgttctatatccaagaagccagctccatgttg
ccccccgcagcgctatttaccccaaatgcggattggcaatgtgtattagatttagcttcg
gcgccgggctctaaaaccacgcaaatggcagcgttaatgaataatcaaggcttattagtc
gccaatgaatattccgctagccgcgtcaaagtactccatgccaatgtgctgcgcatgggc
gccagtcactgcgccctgacccacttcgatggacgggtatttggtgagtatctgtatgaa
agttttgatgcggtattgattgatgccccctgcggcggtgaaggcacagtccgtaaagat
gcggacgcgttaaaatcttggtcactcgatgaggtgctcgaaattagcgaaacccaaaag
gcattaatcgaatctgcatttttggcgttaaaaccgggtggcagtttggtgtattccact
tgcacccttaatcggcacgaaaaccaaggcgtgtgcgaatatttacagcaaacctatggc
gatgcggtgcaatttgaatccttaagccaactgtttgatggcgccgaaaaagccactacg
ccagaaggctttttgcacgtttggccgcaaatttacgacagtgaaggtttttttgtcgct
aagttgactaaaacccgctctgtgccgcgcctgcaacctgagcctaaattgcaaaagaat
ttcccctttacggaggcaagtgtcaaacaagccaaagccattcaagcctattttgccgat
gatttgggtatcgaactgcccgatgatctcattatggtgcgcgacgatgagttttggcta
tttccccatgaatttagagattttattggcaaaatgcgctttcagcggattggggttaag
cttgccgatcacagtaaacatggctttaaagtccgtcatgaagccattatcgcacttgcg
ggaaaagcacttaccgcagggacggcaaacggcgctaaagttgtcgacgttagcgatgag
caagcgaaagagtatttgatgggacgagatattcccctcgatatggctggcaaggctcaa
ggtgaagtgattgtctgttatggcggcgcgcccttaggcatggctaaacatttaggcaat
aaattaaaaaacagcctgcccagagacttagtaaaagataaagtgttattgctaccaccg
caggcataa
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