Shewanella bicestrii: CF168_13505
Help
Entry
CF168_13505 CDS
T05197
Name
(GenBank) RNA polymerase subunit sigma
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbj03021
]
CF168_13505
Transcription machinery [BR:
sbj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CF168_13505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ASK69795
UniProt:
A0A220UNV7
LinkDB
All DBs
Position
3121972..3122535
Genome browser
AA seq
187 aa
AA seq
DB search
MFANWRKKSVEPAVSSDMLSKQRRYNSLVKALHADIFRYAFWLCGDKQVAEDITQETFLR
AWRSLDSLQDDKAAKAWLITILRRENARRFERKQFDYADVEQDSLEDHIASSTEEQTEQY
WLRRQIAKLDIEYREPLLLQLIGGFSGDEIAQLLELNRNTVMTRLFRARNQLKELLEKTE
VRGQSNG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctaactggcgaaagaaatccgtcgagcctgcggtctcttctgacatgctgagc
aaacaacgacgatacaatagcctagtcaaggcgctgcacgccgatatcttccgctatgcc
ttttggttatgcggcgataagcaggtggcagaggacatcacccaagaaaccttcttgcgg
gcatggcgctctttagattccctacaggatgataaagcggcgaaggcttggctgatcacg
attctgaggcgcgaaaatgcccgtcgattcgagcgcaaacaattcgattacgccgatgtc
gagcaagacagcttagaagatcacatcgcctccagcacagaagagcaaactgagcaatat
tggctgaggcgacaaatcgctaagctggatattgaatatcgggaacccttattactgcaa
ttgattggcggttttagtggggatgaaatcgcccaactattggaactgaatcgtaatacc
gtgatgacgcgtttatttcgggcgaggaaccaattgaaagaattacttgagaaaactgag
gtaagaggccaatccaatggatga
DBGET
integrated database retrieval system