Shewanella bicestrii: CF168_16005
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Entry
CF168_16005 CDS
T05197
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
sbj
Shewanella bicestrii
Pathway
sbj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CF168_16005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbj03019
]
CF168_16005
03110 Chaperones and folding catalysts [BR:
sbj03110
]
CF168_16005
03029 Mitochondrial biogenesis [BR:
sbj03029
]
CF168_16005
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbj04147
]
CF168_16005
Messenger RNA biogenesis [BR:
sbj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CF168_16005
Chaperones and folding catalysts [BR:
sbj03110
]
Heat shock proteins
HSP70 / DNAK
CF168_16005
Mitochondrial biogenesis [BR:
sbj03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
CF168_16005
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
CF168_16005
Exosome [BR:
sbj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CF168_16005
Exosomal proteins of breast cancer cells
CF168_16005
Exosomal proteins of colorectal cancer cells
CF168_16005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
CATASP
Motif
Other DBs
NCBI-ProteinID:
ASK70228
UniProt:
A0A220UPW2
LinkDB
All DBs
Position
complement(3648726..3650645)
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AA seq
639 aa
AA seq
DB search
MGKIIGIDLGTTNSCVAVLDGGKARVLENAEGDRTTPSIIAYTDDETIVGQPAKRQAVTN
PNNTFFAIKRLIGRRFKDDEVQRDVNIMPFKIIQADNGDAWVESRGNKMAPPQVSAEILK
KMKKTAEDFLGEEVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAYGI
DKKQGDNIVAVYDLGGGTFDISIIEIDSNDGDQTFEVLATNGDTHLGGEDFDNRLINYLA
DEFKKEQGLDLRKDPLAMQRLKEAAEKAKIELSSTNQTEVNLPYITADATGPKHLVVKIT
RAKLESLVEDLIIRTLEPLKVALADADLSVSDINEVILVGGQTRMPKVQEAVSNFFGKEP
RKDVNPDEAVAVGAAIQAGVLSGDVKDVLLLDVTPLSLGIETMGSVMTKLIEKNTTIPTK
AQQVFSTADDNQSAVTIHVLQGERKQASANKSLGQFNLDGIEPAPRGMPQIEVMFDIDAD
GILHVSATDKKTGKKQNITIKASSGLSEEEVAQMVRDAEAHAEEDKKFEELVQSRNQADG
LVHATKKQVEEAGDALPSEDKAKIEAAMSAVETAVKGNDKEAIEKATQALIEASAKLMEI
AQAKAQTQGGAQEGAAKQSNATADDVVDAEFEEVKDDKK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaattattggtatcgacttaggcacaacaaactcttgtgtagctgtcctcgat
ggtggcaaagcacgcgtattagagaatgctgaaggcgatcgcacaaccccgtctatcatc
gcttacaccgatgatgagaccatcgtgggtcagccagcaaaacgccaagctgtaactaac
ccaaataacactttcttcgcgatcaagcgtttaatcggtcgtcgcttcaaagatgacgaa
gttcaacgtgacgtgaacatcatgccattcaaaattatccaagccgacaacggtgatgct
tgggttgaatcacgtggcaacaaaatggctccaccacaagtttctgctgaaatcttgaaa
aagatgaagaaaacagcagaagacttcttaggtgaagaagtgacagaagcggtaattacc
gttcctgcatactttaacgattcacaacgtcaagccactaaagatgcgggccgcatcgca
ggtcttgaagttaaacgtattatcaacgaaccaacagctgcagcactagcttacggtatc
gacaagaagcaaggcgacaacatcgttgcagtgtacgacttaggtggtggtacattcgat
atctctatcatcgaaatcgacagcaacgacggcgaccaaaccttcgaagtattagcgact
aacggtgacactcacttaggtggtgaagactttgacaaccgtttaatcaactacttagct
gacgaattcaagaaagagcaaggcttagatctgcgtaaagatccattagcaatgcaacgt
ctgaaagaagcggctgaaaaggcgaagattgagctttcaagcaccaaccaaactgaagtg
aacctgccatacatcactgccgatgcaacaggtcctaagcacttagtggtgaaaatcacc
cgtgctaagttagagtcactggttgaagacttaatcattcgtaccttagagccattaaaa
gtggcactggctgacgctgacttatcagtatcagacattaacgaagtgattttagtgggc
ggtcaaacccgtatgcctaaggttcaagaagcggtttctaacttcttcggtaaagaacct
cgtaaagacgtaaacccagacgaagccgtagccgtaggtgctgcgattcaagcgggcgta
ctgtcaggcgacgtgaaagacgttctgctgttagacgtaacaccactgtctctgggtatc
gaaaccatgggcagcgtaatgaccaagctgattgagaaaaacacgactattccgactaag
gcacagcaagtgttctcaacagccgatgacaaccaaagtgcagtaaccattcacgtactg
caaggtgagcgtaagcaagcgagcgcgaacaagtcattaggtcaatttaacttagacggt
attgagccagcaccacgtggcatgccacaaatcgaagtgatgttcgatatcgacgctgac
ggtattctgcatgtttctgccaccgacaagaaaaccggtaagaaacaaaacatcaccatc
aaagcttcttcaggcttaagcgaagaagaagtggcgcaaatggtacgtgatgctgaagcc
cacgctgaagaagacaagaagtttgaagagttagtgcaatctcgcaaccaagctgacggc
ttagttcacgcaactaagaaacaagttgaagaagcgggcgatgcactgccaagcgaagac
aaagctaagattgaagcggcaatgagcgcggttgaaactgctgtaaaaggcaacgacaaa
gaagccattgaaaaagcgactcaagcgctgattgaagcgtctgctaagctgatggaaatc
gctcaggctaaagctcaaactcaaggtggcgcacaagaaggtgctgctaaacagtctaac
gcgactgccgatgacgttgtcgatgctgaatttgaagaagtgaaagacgacaagaaataa
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