Shewanella benthica: SHEWBE_0687
Help
Entry
SHEWBE_0687 CDS
T06707
Symbol
rmlB
Name
(GenBank) dTDP-D-glucose-4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sbk
Shewanella benthica
Pathway
sbk00521
Streptomycin biosynthesis
sbk00523
Polyketide sugar unit biosynthesis
sbk00525
Acarbose and validamycin biosynthesis
sbk00541
O-Antigen nucleotide sugar biosynthesis
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
sbk01250
Biosynthesis of nucleotide sugars
Module
sbk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
SHEWBE_0687 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SHEWBE_0687 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
SHEWBE_0687 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SHEWBE_0687 (rmlB)
00525 Acarbose and validamycin biosynthesis
SHEWBE_0687 (rmlB)
Enzymes [BR:
sbk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SHEWBE_0687 (rmlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
SQH74664
UniProt:
A0A330LZ46
LinkDB
All DBs
Position
SHEWBE:complement(624554..625615)
Genome browser
AA seq
353 aa
AA seq
DB search
MDTVSNKTILVTGGAGFIGSALIRLLINETSHTVINLDKLTYAGNLKSLTSISANRRYHF
IHGDICNSELIQRLLTQYNPDIVMHLAAESHVDRSIDGSAEFIQTNIVGTYCLLEACRNY
FARLDTEKQATFRFHHVSTDEVFGELGDTGLFTENSPYQPSSPYSASKAAADHLVRAWSR
TYKLPVVLSNCSNNYGPYQYPEKLIPLVLHKALAGESLPIYGDGQQIRDWLHVEDHVRAL
YLVALRGKLGETYNIGGGNEKTNLAVVTEICERLNTCILDKPPGIDDFKQLITFVADRPG
HDQRYAIDASKIEQELGWQPLQNFESGLASTLNWYINNPEWYQEIINPDGQTR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatactgtcagcaataaaacaattttggtcaccggcggtgcaggctttatcggttcg
gcgttaatacgcttgctgataaacgagacgtcacacacagtcatcaacttagacaagctg
acctatgccggtaaccttaaatcactgaccagtatcagtgccaatcggcgctaccatttt
atccatggggatatctgtaatagcgagcttatccagcggttattgactcaatacaatccg
gatatcgtcatgcatctggcggccgaaagccatgtggatcgctccatcgacggctcggct
gaattcatccagaccaatattgtcggcacctactgcctcctcgaggcctgccgcaattat
tttgctcgattagataccgaaaaacaggcgacatttagatttcatcatgtctcaaccgat
gaagtcttcggtgagttaggcgacacagggctgtttaccgaaaatagcccttaccaacca
agctcgccctactcggcaagcaaggcggctgcagatcatcttgtgcgggcctggagtcgc
acctataaactgccggtcgtgctgagtaactgctcgaataactatggcccctatcaatac
cctgaaaaactcatccccctagtactgcacaaggctttagctggcgagtccttgcccata
tatggagatggacaacagatcagagactggctccatgtggaagatcatgtgcgggcactc
taccttgtggccttgaggggcaagctaggtgaaacctacaacataggtggcggtaacgag
aagactaatctggcggtggtgactgagatctgtgaacggttaaacacatgcatcttagat
aagcccccaggtattgatgatttcaaacaactgatcacttttgtggctgacaggccgggt
catgatcaacgctatgccatagatgccagtaaaatagagcaagagctgggctggcagccg
ctgcagaattttgaatctggcttagccagcaccttaaactggtatatcaataacccagaa
tggtaccaagagatcattaatccagatggccagactcgatga
DBGET
integrated database retrieval system