KEGG   Shewanella benthica: SHEWBE_0687
Entry
SHEWBE_0687       CDS       T06707                                 
Symbol
rmlB
Name
(GenBank) dTDP-D-glucose-4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
sbk  Shewanella benthica
Pathway
sbk00521  Streptomycin biosynthesis
sbk00523  Polyketide sugar unit biosynthesis
sbk00525  Acarbose and validamycin biosynthesis
sbk00541  O-Antigen nucleotide sugar biosynthesis
sbk01100  Metabolic pathways
sbk01110  Biosynthesis of secondary metabolites
sbk01250  Biosynthesis of nucleotide sugars
Module
sbk_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:sbk00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    SHEWBE_0687 (rmlB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    SHEWBE_0687 (rmlB)
   01055 Biosynthesis of vancomycin group antibiotics
    SHEWBE_0687 (rmlB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    SHEWBE_0687 (rmlB)
   00525 Acarbose and validamycin biosynthesis
    SHEWBE_0687 (rmlB)
Enzymes [BR:sbk01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     SHEWBE_0687 (rmlB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 adh_short KR NAD_binding_10 NmrA
Other DBs
NCBI-ProteinID: SQH74664
UniProt: A0A330LZ46
LinkDB
Position
SHEWBE:complement(624554..625615)
AA seq 353 aa
MDTVSNKTILVTGGAGFIGSALIRLLINETSHTVINLDKLTYAGNLKSLTSISANRRYHF
IHGDICNSELIQRLLTQYNPDIVMHLAAESHVDRSIDGSAEFIQTNIVGTYCLLEACRNY
FARLDTEKQATFRFHHVSTDEVFGELGDTGLFTENSPYQPSSPYSASKAAADHLVRAWSR
TYKLPVVLSNCSNNYGPYQYPEKLIPLVLHKALAGESLPIYGDGQQIRDWLHVEDHVRAL
YLVALRGKLGETYNIGGGNEKTNLAVVTEICERLNTCILDKPPGIDDFKQLITFVADRPG
HDQRYAIDASKIEQELGWQPLQNFESGLASTLNWYINNPEWYQEIINPDGQTR
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggatactgtcagcaataaaacaattttggtcaccggcggtgcaggctttatcggttcg
gcgttaatacgcttgctgataaacgagacgtcacacacagtcatcaacttagacaagctg
acctatgccggtaaccttaaatcactgaccagtatcagtgccaatcggcgctaccatttt
atccatggggatatctgtaatagcgagcttatccagcggttattgactcaatacaatccg
gatatcgtcatgcatctggcggccgaaagccatgtggatcgctccatcgacggctcggct
gaattcatccagaccaatattgtcggcacctactgcctcctcgaggcctgccgcaattat
tttgctcgattagataccgaaaaacaggcgacatttagatttcatcatgtctcaaccgat
gaagtcttcggtgagttaggcgacacagggctgtttaccgaaaatagcccttaccaacca
agctcgccctactcggcaagcaaggcggctgcagatcatcttgtgcgggcctggagtcgc
acctataaactgccggtcgtgctgagtaactgctcgaataactatggcccctatcaatac
cctgaaaaactcatccccctagtactgcacaaggctttagctggcgagtccttgcccata
tatggagatggacaacagatcagagactggctccatgtggaagatcatgtgcgggcactc
taccttgtggccttgaggggcaagctaggtgaaacctacaacataggtggcggtaacgag
aagactaatctggcggtggtgactgagatctgtgaacggttaaacacatgcatcttagat
aagcccccaggtattgatgatttcaaacaactgatcacttttgtggctgacaggccgggt
catgatcaacgctatgccatagatgccagtaaaatagagcaagagctgggctggcagccg
ctgcagaattttgaatctggcttagccagcaccttaaactggtatatcaataacccagaa
tggtaccaagagatcattaatccagatggccagactcgatga

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