Shewanella baltica OS155: Sbal_1655
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Entry
Sbal_1655 CDS
T00478
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sbl
Shewanella baltica OS155
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbl03400
]
Sbal_1655
DNA repair and recombination proteins [BR:
sbl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sbal_1655
Archaeal homologous recombinant proteins
Sbal_1655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
GTP_EFTU
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABN61167
UniProt:
A3D354
LinkDB
All DBs
Position
1932444..1935500
Genome browser
AA seq
1018 aa
AA seq
DB search
MRPLSLSMSAFGPFASTQTLDFTALGTNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE
REGSQMRCDMADDSLLTEVTFSFQLGSNSYRIRRVPEQERVKKSGDGSTVQKPEAQLYKI
DADGNESLLVASKVSEATAEIEALTGLDVEQFRQVMVLPQGKFRELLMADSKARELIFSQ
LFQTHIYRRIEDTLKNKAADISALVKAQRSRRDGILQSAGLASDDELSNELAKLTPELAL
AQSAKEQALQQQQLIIKASDAAQHLLAEFAQFDTLTQTAAALEAQQESIVAQTHKLNLAN
QAQRLAPMVEVFLAREQEAKAANLAFSHAQTALTQAKQAFDDAELKAQDLPVLEASLLEQ
EQAKQQLNALGPQLRELDRLNKTLEQEQAQLVRAKAQLQNSKNELTAATQKRRELESALP
PLQANSDTRLSLQQAHQQQQQLLSTYQQWQQVAARVSSTKEKLAEAKAQGQQLNAEHQQA
QVAHKALLLTWHQGQAAILARQLQQDEPCPVCGSQTHPQPAQSQEPLPSDEALQLAQDTE
TTAQEVLSKARAEYRGLDAQFKILQQQSQDLVAQLGTAVDISQDQHAHTLSQYAFSLTQA
EQAHQDLQQLQQEIVLLHAQETHLQQKLEQGQTHDSALQSKVDLLQGQLAHIQQSVPPAL
ATLEALTAAITQNQQQISQIKQQIADVRALQQQTGQTFVAAKAALNGAENTAEAALAQQT
RAQQQLNQQLVAAGFTDQQALFAAMLDEDQLHALASEIEAYQQRSALTKAQCEQLALKLK
DKVPPDSIKIAAELESAQQALHAAEQAWQLLHTRTVLLTQTQTQLSIADTKAKALDDEYA
VIGTLADVANGKTGNKISLQRFVLSVLLDDVLLEASHRLHLMSKGRYRLLRKEDRAKGNK
ASGLELEVEDAYTSKVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSSGRMIGVISHVSEMKEQINTRIDINKTSHGSEMTIVLP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgagaccccttagcctttcaatgtcagccttcggcccctttgcatcgactcagacactt
gattttaccgcccttggaaccaatccattatttttaatcaacgggcctacaggcgcgggt
aagacgaccttgctcgatggcatttgttttgcgctctatggcaaaaccacaggtaatgag
cgtgaaggcagccagatgcgctgcgatatggccgacgatagtttactaacagaagtcact
ttcagttttcagctcggcagtaacagctatcgtattcgccgggtgccagagcaagaaaga
gttaaaaaaagcggtgacggctcgacagtgcaaaagcccgaagcgcagctctataaaatt
gacgccgatggcaatgaaagcttattagttgccagtaaagtgtccgaggccaccgctgag
attgaagccttaactgggctcgatgtggagcagtttcgccaagtgatggtattacctcag
ggtaagtttcgcgaattgttaatggcggactctaaagcgcgcgagctgatatttagtcag
ttatttcaaacgcatatttatcgccggattgaagatactttaaaaaataaggctgccgat
attagcgccttagtgaaagctcaacgcagccgccgcgatggtattttacaaagtgcgggc
ctagcatccgatgacgagctaagcaatgaattagccaagctcacacctgaacttgcgctc
gctcaaagtgccaaggaacaggcattacagcagcaacaattaatcattaaagccagcgat
gccgcccagcatttactggctgaatttgcgcagtttgatactttaactcaaaccgcagca
gcgctcgaggcgcagcaagaaagcatagtcgcgcaaacccataagctgaacttagctaat
caagcgcagcgtttagcgcctatggttgaggtgtttttggctcgtgaacaagaagcaaaa
gccgccaatctcgcctttagtcatgcgcaaacggcgttgactcaggccaagcaagccttt
gatgatgccgagctcaaagcgcaagacttgcccgtattggaagcgtcgctactggaacag
gaacaagccaaacagcaactgaatgcgctggggccgcagcttagggagctggatagactc
aataaaactctcgagcaagagcaagcgcagttagttagggctaaagcacagcttcagaac
agtaaaaatgagttaaccgccgcaacccaaaaacgccgtgaacttgaatcggctttgcca
ccattgcaggctaacagcgacactcgcctctcattgcaacaggcgcaccagcagcaacag
cagttattgtcgacttatcagcaatggcaacaagtggcggcaagggtatcgtcgacaaag
gaaaaacttgccgaggcgaaagcgcaagggcaacaactcaatgctgagcatcagcaagca
caggttgcgcataaagccctattattgacttggcaccaaggacaggcggccattttagcg
cggcaattacagcaagatgaaccttgtcccgtctgtggcagccaaacccatccacagcca
gcacagagccaagagccgctcccaagtgatgaagcgctgcaattggcccaagacacagaa
acaacggcccaagaagtcctgagtaaagccagagcagaataccgcggattagatgcacag
ttcaaaatcttgcaacagcaatcacaagatctcgtggcccaattgggcacagcggttgat
atttctcaagatcaacatgcgcataccttgtcgcaatatgctttttccctcacgcaagct
gagcaagctcatcaagatttgcagcagttacagcaagaaattgtcttgttgcacgcgcag
gaaacgcatctgcaacaaaagctggagcaaggacaaacacacgatagtgcgctgcaatct
aaagtggatttattgcaggggcagttagcgcacatacagcaaagcgtcccacctgcgctt
gcaacgcttgaggcattaaccgcagctatcacgcaaaaccagcaacaaataagccagatt
aaacagcagattgctgacgtgagggcgcttcagcaacaaacagggcaaacctttgttgca
gctaaagcggcgcttaatggtgccgaaaataccgcagaggcggcattagctcagcaaacg
cgtgctcagcagcaactcaatcagcaattagtcgcagcgggatttaccgaccaacaggcc
ttatttgcggccatgctggatgaagatcaactgcatgcattagccagcgagattgaggct
taccagcagcgcagtgctttgaccaaggcgcagtgcgagcagttagcgctgaagctcaaa
gataaagtgccacccgatagcattaagatcgctgccgagcttgagtcggcgcagcaagca
ttacacgcagcagagcaggcatggcagctgcttcacactcgcacagtactactgacccaa
actcaaacccagctcagtattgcagatacgaaagctaaggcgttagacgatgaatatgcg
gttatcggcacgcttgccgatgtggcgaatgggaaaacaggcaataagatcagtttgcag
cgttttgtattaagcgtactgctcgacgatgtgttactcgaagcgagccataggctgcat
ctgatgagtaagggacgttatcgcttgctgcgtaaggaagatagagcaaagggcaacaag
gcgtctgggctcgagttagaagtggaggatgcctacacctcaaaagtgcgccctgtggca
accttaagcggcggcgaaagttttatggcggccttgtccatggcgttagggctatccgat
gtggtgcaagcttatgctgggggcatcaaactcgacactttatttatcgatgaaggcttt
ggcagtttagaccaagattcattggaattggcgattcgaaccttgatggatctgcagtct
tcgggccgcatgataggggtgatctcgcacgtttctgagatgaaagagcagataaatact
cgcatcgacatcaataaaacctcacatgggagcgaaatgacgatagttttgccttag
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integrated database retrieval system