Shewanella baltica OS155: Sbal_1898
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Entry
Sbal_1898 CDS
T00478
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sbl
Shewanella baltica OS155
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbl01002
]
Sbal_1898
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbl01011
]
Sbal_1898
Peptidases and inhibitors [BR:
sbl01002
]
Cysteine peptidases
Family C82
Sbal_1898
Peptidoglycan biosynthesis and degradation proteins [BR:
sbl01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Sbal_1898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABN61404
UniProt:
A3D3U1
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All DBs
Position
2201430..2202995
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AA seq
521 aa
AA seq
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MVLHKIIQYFSPFVCASQIKRMPMSRCLGLLVLSVIVCFPITSVAMATDDTQAISSNPSI
GAQQDMLQLNSVQPSTESKVDEPDAALPLTALVPQVLLLDLAGVNPIFGLHYRELTLSPN
TLSAADMARVQADVTGYWRYIKTFAQCNNGAPVDTVSAVIPTDLHYQRVLKQVAHLVQLD
ATEPWETLVLDEKLTVGMSHPFVDTIAKRLWLLGDLAIEPTTNLVYSEELVVGVKRFQQR
HGLKQDGVIGKQTLYWLNQSPKARAVLLAKNTIRQRVFERKLEPSYLLINVPAFEMILVD
NGTTVLNSKVIVGKSSRQTPLLDSQISSVVLNPSWRVPSSILRRDILPQIRRNGHYLNER
QFDVYDYNGQLVQHMPEEWQDLASTSFPYQLVQRPGAKNALGKYKFHFDNSFSVYLHGTS
EPSLFNKDDRALSSGCIRIEKVTELAQWFKEHLVKDKRLWDKLVPDVTEPQWFSLSQKLP
VHLVYWTAWLDDSGQEQYRSDIYHLEAELTNAVPATVLDLN
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggtattgcacaagatcatccagtatttctcaccgtttgtatgcgcatcgcaaattaaa
cgtatgcccatgagtcgctgtttgggactgttagtgctgagcgttattgtctgctttcct
atcacgtcagtggcaatggctaccgatgatactcaagccatttcatcgaatcccagcatt
ggtgcacagcaagacatgctgcagctaaacagtgtgcaaccaagcactgagagtaaagtc
gatgagcccgatgcagccttgccacttacggcattagtgccgcaggtgttgctgctggat
cttgcgggcgttaatcctatttttggtctgcattatcgtgaattaacactatcaccaaat
accttatcagcggccgatatggcgcgggttcaagctgatgtgacgggctactggcgttat
atcaagacctttgcgcagtgtaacaacggcgctcccgtagacacagtgtcagccgttatt
ccaacggatcttcactatcaaagggtgctaaaacaagtcgcccatttagtgcaactggat
gcgactgaaccttgggaaactttagtgctggatgaaaagttaacggtcggaatgagtcat
ccattcgttgatactatagctaaacgtttgtggcttttgggtgacttagccattgagcca
acgacgaaccttgtctatagcgaagaattggtggtcggtgttaagcgtttccaacaaagg
catgggttaaaacaggacggggtgattggtaagcagaccttgtattggctgaatcaatcg
ccaaaggcgagggcagtcttactggctaaaaatactattcggcaacgagtgtttgaacgt
aagttggagccaagctacttgctgattaacgtgcccgcctttgagatgatcttagtcgat
aatggcaccacagtgctcaattccaaagtgattgtgggtaaatcttctcggcaaaccccg
ctgctggatagccagatttccagcgtggtcctcaatcccagttggcgagtgccgagcagc
attctacgccgagatatcctgccgcagattcggcgaaatggtcattatcttaatgaacgc
caatttgatgtgtacgactataacggccaactagtgcaacatatgccagaagaatggcag
gacttagccagcacttcgtttccctatcagctagtgcaacgcccaggggcgaagaatgca
ttaggcaaatataagtttcactttgataacagtttcagtgtctatttacatggcacttct
gagccaagtctctttaataaggacgatagggcactatcatcaggctgtattcggattgaa
aaagtcactgaattagcccagtggtttaaagaacatttagttaaagataagcgtttatgg
gacaaattagtcccagatgtaacggagccgcagtggttttcactttctcaaaagctgcca
gtgcatctggtgtattggactgcatggctggatgacagtgggcaagagcaataccgtagc
gacatttaccatttagaagctgagttgacgaatgccgtacccgccacggttttagatctc
aattaa
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