Shewanella baltica OS155: Sbal_2000
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Entry
Sbal_2000 CDS
T00478
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sbl
Shewanella baltica OS155
Pathway
sbl03030
DNA replication
sbl03430
Mismatch repair
sbl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sbal_2000
03430 Mismatch repair
Sbal_2000
03440 Homologous recombination
Sbal_2000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbl03032
]
Sbal_2000
03400 DNA repair and recombination proteins [BR:
sbl03400
]
Sbal_2000
Enzymes [BR:
sbl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sbal_2000
DNA replication proteins [BR:
sbl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sbal_2000
DNA repair and recombination proteins [BR:
sbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sbal_2000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABN61504
UniProt:
A3D441
LinkDB
All DBs
Position
2321708..2322436
Genome browser
AA seq
242 aa
AA seq
DB search
MNIISNANRQVILDTETTGMNQGSGAIYLGHRIIEIGCVEVVNRRLTGRYYHQYINPGQA
IDPEAIAVHGITDERVSKEPRFHQVAQDFINFIDGAEIVAHNANFDVSFMDHEFSLLQPR
GPKTADICQILDTLVIAKFLHPGQKNNLDALCKRYGVDTSRREYHGALLDAEILADVYLI
MTGGQTKFNLSNEEAGQEAGGIQRFDPQSLNLKVIGASADELTMHEQRLDLVAKSGKCLW
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgaatattatctctaacgctaaccgtcaggttattttggataccgaaaccacaggtatg
aaccagggcagcggcgccatctatttaggccataggatcatcgagataggttgtgtggaa
gtggtgaaccgtcgtttgacggggcgttattaccaccaatatatcaatccaggtcaagca
atcgatccagaagccatcgccgttcacggtattaccgatgagcgcgtttccaaagagccg
cgttttcatcaagttgctcaagactttatcaactttatcgacggcgctgaaatcgtcgcc
cataacgcgaacttcgacgtgagcttcatggatcatgagttttcactgttgcagccgcgt
ggaccaaaaaccgctgatatttgtcagatcctcgataccttagtcatcgctaagttcctg
catcctggtcagaaaaacaaccttgacgccctctgtaagcgttatggcgtggatacgtcg
cgccgcgaatatcacggtgctttgctcgatgccgagatcctcgccgatgtttatctgatc
atgaccggcgggcagacaaagtttaatttgtctaacgaggaagcggggcaggaagcgggg
gggattcaacgttttgatccgcaatcacttaaccttaaagtgatcggcgcttcggccgat
gaattgactatgcatgaacaacgccttgatttagtcgcgaaatcaggcaaatgcctctgg
agaggatag
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