Shewanella baltica OS155: Sbal_2257
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Entry
Sbal_2257 CDS
T00478
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sbl
Shewanella baltica OS155
Pathway
sbl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sbal_2257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbl03400
]
Sbal_2257
DNA repair and recombination proteins [BR:
sbl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sbal_2257
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sbal_2257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_22
AAA_30
DUF724
Ish1
AAA
Kinesin
UB2H
Motif
Other DBs
NCBI-ProteinID:
ABN61753
UniProt:
A3D4U0
LinkDB
All DBs
Position
complement(2610631..2612637)
Genome browser
AA seq
668 aa
AA seq
DB search
MSESVFQLESQFAPAGDQPTAIAKLVDGLEAGLACQTLLGVTGSGKTFTIANVIQKLGRP
TIIMAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPASNTFIEKDASVNAHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPDSYLKMLLHLRQGDVMGQRDILIRLSEL
QYKRNDIELQRGTYRVRGEVIDVFPADSERNAIRVELFDDEIERLSEFDPLTGHIIKRIA
RTTVYPKTHYVTPREKIIAATEFIKEELRERKQYLLDNNKLIEAQRIHERVQYDVEMMVE
LGYCSGIENYSRYLSGRAPGEGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKT
TLVEYGFRLPSALDNRPLKFEEFEQLMPQTIYVSATPSVYELEKSEGEIAEQVVRPTGLL
DPELEVRPVGTQVDDLLSEIAKRVAVNERVLVTTLTKRMSEDLTEYLDEHGVKVRYLHSD
IDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYADRITNSMAKAIGETDRRRERQRAHNLKHGITPKGVVKRITDVMDV
DDGRDSKAVYGKVAEPKSHYHKADATELSHQIDQLEKKMHEHARNLEFEQAAAMRDEVKH
LRDLLIKA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaatctgtttttcagcttgaatcgcaattcgcccccgcaggcgaccaacctaca
gcgatagccaaattagtcgatggactcgaagcgggtttagcttgccaaaccttactcggg
gtgacgggctcaggtaaaaccttcacgattgccaatgtaatccaaaaattaggtcgcccc
acgattatcatggcgcctaataaaaccttggcagcgcagctttatggcgagatgaaagag
ttctttccccataatgcggtcgagtattttgtttcttactacgattactatcagccagaa
gcctatgtgcctgcatcaaatacctttatcgagaaagacgcgtcggttaatgcccacata
gagcaaatgcgcctgtcggcgacaaaggcgctgttagagcgtaaagatgtggtgctcatc
gcctctgtgtcggccatttatggtttgggcgatcccgactcctatttaaaaatgttgctg
catctacgccaaggcgatgtgatggggcagcgtgatatcttaattcgtctcagtgaattg
cagtataaacgcaatgatatcgagctacagcgtggtacctatcgcgtgcgtggtgaagtg
attgatgttttccctgccgattctgagcgtaatgccattcgtgttgagttgttcgacgat
gagattgagcgtttaagcgagtttgatccgttaaccggtcatatcattaagcgcatcgcc
cgtacaacggtttaccctaagactcactatgtgacgccgcgggaaaaaatcatcgccgcc
actgagttcattaaagaagagctgcgtgagcgtaagcaatatctactcgataataacaag
ttaattgaagcccagcgtatccatgagcgagtgcaatacgatgtggaaatgatggtggag
ttaggttactgctctggcatcgaaaactactcgcgctatttgtcaggccgcgcaccgggg
gaagggccgccaaccctactcgactatttgcccgctgacggtctattaattatcgacgaa
tcccatgtgactgtgccgcaaatcggcgccatgtacaaaggtgaccgttcccgtaaaacc
acattggtggaatacggtttccgcttaccgtcagccttggataaccgaccgctcaagttc
gaagagtttgagcaattgatgcctcaaaccatttatgtgtcggcgacaccgagtgtctac
gagctggaaaagagcgaaggcgagattgccgagcaggtcgtgcggccaacgggtttactc
gatcctgaattagaagtgcgtcctgttgggactcaagtggacgatttattgtctgagatc
gccaagcgcgttgctgttaacgagcgggtgttagtgacgacgctgaccaagcgtatgtcg
gaggatttgaccgaatacctcgacgaacatggtgtaaaagtgcgttatttgcactcggat
atcgacacggttgaacgggtggagatcatccgcgatctgcgtttaggtaagtttgatgtg
ttggttgggatcaacttattgcgcgaaggcttagacatgcctgaagtgtcattggtgtgt
attttagatgcggataaagagggcttcctgcgctcagaacgctcgctcatccaaaccatt
ggccgcgccgcgcgtaacgttaatggcaaagtaatcctctatgccgatcgcattaccaat
tcgatggcgaaggccattggtgaaactgaccgccgacgtgaacgccagcgcgcgcacaac
ttaaagcacggcatcacacctaagggcgtggttaaacggatcaccgatgtgatggatgtg
gatgacggccgcgacagtaaagctgtgtatggtaaagtggctgaacctaagtcccattac
cataaagccgatgcgactgagttgagccatcaaatcgatcagcttgagaagaagatgcac
gaacatgcgcgcaacttagagttcgaacaagcggcggcgatgcgtgatgaagtcaagcat
ctgcgggacttgttgatcaaggcctag
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integrated database retrieval system
