Shewanella baltica OS185: Shew185_0748
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Entry
Shew185_0748 CDS
T00571
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sbm
Shewanella baltica OS185
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbm03019
]
Shew185_0748
03009 Ribosome biogenesis [BR:
sbm03009
]
Shew185_0748
Messenger RNA biogenesis [BR:
sbm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Shew185_0748
Ribosome biogenesis [BR:
sbm03009
]
Eukaryotic type
Pre-60S particles
RNases
Shew185_0748
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABS06905
LinkDB
All DBs
Position
882597..883211
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AA seq
204 aa
AA seq
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MEQFFLFGDLETGGLNGRLDNGMLGMEYYPIFELAFIVTDSELNQVGEALHIVVHQDDEH
IARSHEWAIDVHTKSGLLAAVRASSVSLAQAEQMVLEHLKALGIPKHDRKAKTGVVFAGN
SIMLDRSFIMCQMPELHEYMHYRQLDISALGLAARAWAPEVERNAIKAKQYQHEALADIR
ESIAELKYYRDELFGCEISPLSIG
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggagcaattctttttgtttggtgatttagaaacgggtggacttaacggccgcttagac
aatgggatgctgggtatggagtattaccctatctttgagctggcctttatcgtgactgat
agtgagctaaaccaagtgggtgaagcgctgcacattgttgtgcatcaagacgatgaacac
attgcaaggtcacatgagtgggcgatagatgtgcataccaagagtgggttgttagctgct
gttcgtgcctcatcagtatcgttagcacaggctgagcagatggtactcgaacacctgaaa
gcactgggaatacctaagcatgaccgtaaagctaagactggtgtggtgtttgcgggtaac
tcaatcatgcttgatcgttcgtttatcatgtgccaaatgcctgagcttcatgagtacatg
cattacagacagctagacatatcagcattagggctcgcagctagagcttgggcgcctgag
gttgagcgtaatgcgattaaggctaagcagtatcagcatgaagccttagccgatattcgg
gagtcgatagcagaactcaagtactatcgcgacgagttgtttggttgtgaaatatcacct
ttgtcaataggttag
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