Shewanella baltica OS185: Shew185_2271
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Entry
Shew185_2271 CDS
T00571
Definition
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00550
Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Shew185_2271
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbm01002
]
Shew185_2271
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbm01011
]
Shew185_2271
Enzymes [BR:
sbm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Shew185_2271
3.4.21 Serine endopeptidases
3.4.21.-
Shew185_2271
Peptidases and inhibitors [BR:
sbm01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
Shew185_2271
Peptidoglycan biosynthesis and degradation proteins [BR:
sbm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Shew185_2271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
ABS08409
LinkDB
All DBs
Position
2706682..2708190
Genome map
AA seq
502 aa
AA seq
DB search
METLLKTTLYASLLLAASHTIARADQIDAGAIETRTTSLSQAVGKISPRHSQIALLAMDM
SNNQVIFSQQAETLFIPASTQKLLTAVSAMTQLGPDFRYVTELWTDAPIRKGHIAGSAYL
RFSGDPTFTQADLKAIFASLVKQGINRIDGHLYLLGDKKEQMQAPGWVWDDLGICFAAPV
SSYIINQNCVYGQFNPSTANKPSQVSLRTGSYGVKVSSDAVFDPKASREFCQLDLVRLGQ
NNYHLRGCYPGGEAIGLAIAVSDPFKFAQDNLTSLLKGEMSLAGKVKLGTSLPKKAKLIA
SHSSAPLPELLDTMLLKSDNLIADSLFKQLGKSYFNTQGSFTNGAAAMLRILTELGVDLS
NANIVDGSGLSRYNLLNAQQLAAVLALIHKDSRFSTLMTSLPQAGISGTLRYRMGYNKPP
LKKQIFAKTGSMQGVSNLAGFIRLPEHSDTLFVVLENGMSPELKHQHKPSFNAEFLKQLI
SVLQVPSPTTAALSTAAHSVQD
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgttactgaaaaccactctgtatgccagcctactcttagcggcgagccacact
atcgcccgcgctgatcaaatcgacgcaggagcgatagagacccgaaccacttcgcttagc
caagcggtcggcaaaatcagccctcgtcattcgcaaattgcactgctggcaatggacatg
tctaacaatcaagtgatctttagccaacaggccgagacgctgtttattcccgccagcacg
caaaaattactcaccgctgtgagcgccatgactcagcttgggcctgattttcgttatgtc
actgaattatggacggacgcaccaatacgcaagggccatatcgccggcagcgcttatctg
cgttttagtggcgatccgacgttcactcaagccgatctcaaggccatttttgccagtctc
gtgaaacaaggcattaatcgcattgatggacatctgtatttgctcggcgataaaaaagag
caaatgcaagcccctggctgggtttgggatgacttaggcatttgttttgccgcgcctgtg
tcgagttacattatcaatcaaaactgcgtctatggtcagttcaaccccagcacggccaat
aaaccatcgcaggtgagcctgcgcacggggagttatggggtaaaagtcagcagcgatgcg
gtatttgatcccaaggcgagtcgtgaattttgccagctcgatttggtacgactaggccaa
aacaactatcatctacgtggttgttatccgggcggtgaagcgattggactggcgattgcg
gtcagcgatccgttcaaatttgcccaagataacctcacctcgctgctcaaaggcgagatg
tcactggcgggtaaagttaagctcggcactagcttgcccaaaaaggcgaaactgattgcc
agccatagctcggcgccactgcctgaactgctcgatactatgttgctcaagtcggataat
ttgattgctgatagcctgtttaaacagcttggcaaaagttatttcaacacccaaggtagc
tttaccaatggtgcggcagccatgctgcggattttaacggagttaggcgtcgatctgagt
aacgctaacattgtcgatggttcagggctgtcacgctataacttgctcaatgcacagcag
ttagcggcggtattggcactcatccataaggacagccgctttagcacgttaatgaccagt
ctgccgcaagcaggaataagcggcaccttaaggtatcgcatgggttacaacaagccgccg
ctgaaaaagcaaatttttgctaaaacaggctcgatgcaaggcgtgtctaacttagcgggg
ttcatccgtttgcctgagcacagtgacaccctgtttgtggtgcttgagaatggcatgagt
cccgagcttaaacatcagcataaaccatcgtttaatgccgagtttctcaagcaattgatt
tcagtgctgcaagtgccatcccccaccacagcagcgcttagtaccgctgctcactcggtc
caagattaa
Shewanella baltica OS185: Shew185_3321
Help
Entry
Shew185_3321 CDS
T00571
Definition
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sbm
Shewanella baltica OS185
Pathway
sbm00550
Peptidoglycan biosynthesis
sbm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Shew185_3321
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbm01002
]
Shew185_3321
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbm01011
]
Shew185_3321
Enzymes [BR:
sbm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Shew185_3321
Peptidases and inhibitors [BR:
sbm01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Shew185_3321
Peptidoglycan biosynthesis and degradation proteins [BR:
sbm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Shew185_3321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
ABS09448
LinkDB
All DBs
Position
3954248..3955423
Genome map
AA seq
391 aa
AA seq
DB search
MMNFVKSPIKTLLLISSASLPVYAAQPIITPDAPSVAAKAFVLMDYNSGQIIAESNAYES
LNPASLTKMMTSYVIGQEIKAGNVSVDDDVTISKNAWSKNFSDSSKMFIEVGTTVKVGDL
NRGIIIQSGNDACVAMAEHIAGTEGAFVDMMNSWAKQLGMRDSYFENAHGLDAENHKSTA
YDMALLGAALIRDVPDEYHIYSEKFYTFNGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGY
NLVASATKDGMRLISVVMGTQSESARKAESKKLLTYGFRFFETVTPYKAGDSFITQQIWY
GDKSTVDLGVATDTPITISRGRGKDLKANFELTKPLDAPLKKGETVGRLFFQLDGKDIAQ
FPLVTLQEVNEGSWFSKLVDYFKQMFSGWFS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattttgtaaaaagtcccattaaaacattgctgctaatttccagtgcctctctc
cccgtttatgctgcgcagcctattattacacctgatgcaccttcagtagccgccaaggcg
ttcgtattgatggattataattcgggtcagattatcgctgaaagtaacgcttacgaaagc
cttaacccagccagtttaactaagatgatgaccagttacgtgatcggtcaagaaatcaaa
gcgggcaatgtctccgttgatgatgatgtgactatcagtaaaaatgcttggtctaaaaac
ttctcagactcttctaagatgttcattgaagtgggcactacggttaaagtgggcgaccta
aaccgcggtatcattattcaatcgggtaacgatgcgtgtgtggcgatggccgagcacatt
gctggtactgaaggcgccttcgttgacatgatgaactcatgggcgaagcaattggggatg
cgtgatagctacttcgaaaacgcccacggtttagatgcagaaaaccacaaatcaaccgcc
tatgatatggcattactgggcgcagcgttaatccgcgacgtgccagatgaataccacatc
tatagcgaaaaattctatacattcaatggtatcaaacaatacaaccgtaatggtttattg
tgggataacagcatgaacgtggacggtatcaaaaccggtcacacctcaggtgcaggctac
aacttagtagcatcagcaaccaaagacggcatgcgtttaatttcagtggtgatgggcact
caaagtgaatctgcccgtaaagctgaaagtaagaaattactgacctatggcttccgtttc
ttcgaaaccgtaacaccatacaaggcgggcgatagctttatcactcagcaaatttggtac
ggtgacaagagcacggttgatttaggcgtggcaactgacacacctatcaccatcagccgt
ggccgtggtaaagacttgaaagctaacttcgagctgactaagccattagatgcaccgttg
aaaaaaggtgaaactgttggccgtctattcttccaacttgatggtaaagacatcgcccag
ttcccactggtgacgttgcaagaagtcaacgaaggcagctggtttagtaaattagtagat
tactttaaacagatgttttctggatggtttagctaa
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integrated database retrieval system
