KEGG   Shewanella baltica OS185: Shew185_3742
Entry
Shew185_3742      CDS       T00571                                 

Definition
(GenBank) penicillin-binding protein 1B
  KO
K05365  penicillin-binding protein 1B [EC:2.4.1.129 3.4.16.4]
Organism
sbm  Shewanella baltica OS185
Pathway
sbm00550  Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:sbm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Shew185_3742
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:sbm01003]
    Shew185_3742
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sbm01011]
    Shew185_3742
Enzymes [BR:sbm01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.129  peptidoglycan glycosyltransferase
     Shew185_3742
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Shew185_3742
Glycosyltransferases [BR:sbm01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   Shew185_3742
Peptidoglycan biosynthesis and degradation proteins [BR:sbm01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   Shew185_3742
SSDB
Motif
Pfam: Transgly Transpeptidase UB2H
Other DBs
NCBI-ProteinID: ABS09866
LinkDB
Position
complement(4445264..4447639)
AA seq 791 aa
MIRTSLTVVPVADVFKCMNDEVDMTTKTTKKTPASRRANNGRGLFRRMWSITWKLGLAGL
AVVTFYSIYLDQIIAQKFEGQKWHLPAQVFSRSMALYPGAAVSHPQMMAELKLLGYRKVA
NPRQVGEFSASSTRIELWRRPFLHPEGDQVEQRVMISFDSNGVSSVSRVSDKRQLAVFHL
EPVLLDRIITGDGEDRLFVPTEEMPKSIVQALLLVEDRSFYEHHGVNPFAIARAAFVNIS
AGRTVQGGSTLTQQLAKNFFLSSERSLLRKVREALMAVIIDFRYSKDEILEAYLNEVYMG
QDKSRAVHGMGLASRFYFGRPISELTIAQQAFLVAAIKGPSYYNPWRYPERIQERRDLVL
RLLMDAGDLTTAEYKAAVESPLAIRNLNKPAHQKLPSFFALVKQEVNERYGDALLKQSGV
KIYTTLDPMAQEAAEIAVTQTLKSLDKSNKSLQVGMVVTDKYTGGIAAMVGDKTPGFDGF
NRAVEIRRPIGSLIKPFVYATALAPNSQFTLATPLKDQPITLKSEQGKTWSPQNFDKKFS
GQVPLLTALKKSMNVPTVNLGIAVGVDAVATTLAKSGWQEPLNEYPSMLLGAVNGSPLMV
AQVYQTLADSGVYRKLTTVTAVLDADKNPLPVTRLPKEQAISPDTDFLIQYAMQQVVNTG
TATRLGNAFPGVGLAGKTGTSNDSRDSWFAGFDERNVAAIWVGRDDNGKTSLYGSSGAMA
VYLAFLKERPPISLRSIQVNGVVKGFFDRDTGVAKESDCSNVDALPALTATYRPVNNCGE
PLQWWQKILGQ
NT seq 2376 nt   +upstreamnt  +downstreamnt
ttgattcgcacctcgctcactgttgtgcctgtggctgatgtctttaaatgcatgaatgat
gaagtagatatgacgactaagacgacaaaaaaaacacccgcttcccgtagggccaataat
ggccgcggtttatttcgacgaatgtggtcaatcacttggaaattaggcttagccggatta
gctgtagtgacgttctacagcatttatctcgatcaaattattgcgcaaaaatttgaaggc
caaaaatggcacttgcccgcgcaggtgttcagccgttctatggcgctgtatcccggcgcg
gcggtcagtcatccgcaaatgatggctgagcttaagttgctcggctatcgcaaagtcgcg
aatccacgccaagtgggagagttttcggcatcgagcactcgtatcgaattgtggcgtcga
ccgttcttgcatcctgaaggcgatcaagtcgaacaaagagtcatgatcagcttcgacagc
aatggcgtcagttcagtctcccgggtgtcggacaaacgccagcttgccgtattccatctt
gagcctgtgttgctcgatcgcattattactggcgacggtgaagacaggctgtttgtgccg
accgaagaaatgcctaagtcgattgtgcaggcgttattgctggtggaagaccgtagcttt
tacgaacatcatggggtgaatcccttcgcgattgcgcgcgccgcgtttgtaaacattagc
gccggtcgcacagtgcaaggtggctcaacattaacccagcagttagcgaaaaactttttc
ctatcgagtgagcgttctttactgcgtaaggtgcgcgaagccttgatggcagtgattatc
gattttcgttacagcaaggacgaaatcctcgaagcctatcttaacgaagtgtatatgggg
caggataaatcccgcgccgttcatggtatgggtttggcatcgcgtttctatttcggccgt
ccaatcagtgagttgactatcgcccagcaggcatttttagtggctgcgattaaggggccg
tcttactacaatccatggcgatatccggagcgcattcaagagcgtcgcgatctggtactg
cgtttactcatggatgcaggcgatttaaccacggcagagtacaaggcggcggtagagtca
cctctggcgatccgtaatcttaataagccagcacaccagaaattaccttctttcttcgcc
ctggtaaaacaggaagtgaacgagcgttatggcgatgcgttactgaagcaatctggggta
aaaatctataccacgctcgatcctatggcccaagaagccgccgaaattgcggtgacacaa
acccttaaaagcttagataagagcaacaagtcattgcaggtaggcatggtggttaccgac
aaatacacgggcggtatcgcggcaatggtcggcgataaaacccctggatttgatggtttt
aaccgcgcggttgaaattcgtcgtccgattggctcgttaattaagccctttgtgtacgcc
actgcactggcacccaatagccaatttaccttagcgactccccttaaagatcagcctatt
accttaaagagtgagcaaggtaagacatggtcaccgcaaaacttcgataagaagttcagc
ggccaagtgcctttgttaacggcgctgaaaaaatcgatgaacgtcccgacagtaaatctt
gggattgcggtgggcgtggatgccgtcgcgacaactttggctaagtcgggctggcaggag
ccattaaacgagtatccttctatgttacttggcgccgtcaatggctcgccattaatggtg
gcgcaggtgtaccaaaccttagccgatagcggggtttaccgtaaattaaccacagtgacg
gctgtattggatgctgataaaaatccattgcccgtgacgcgattacctaaagagcaggcc
atctcacccgatactgactttttgatccagtacgctatgcagcaagtggtcaatacgggc
acagcgacgcgcttaggcaatgccttcccaggcgttgggctggcgggtaaaacaggcaca
agtaacgacagccgcgactcttggtttgcgggctttgatgagcgtaacgtcgctgctatt
tgggtggggcgtgatgataacggcaaaaccagcttgtatggcagcagtggcgccatggcc
gtgtaccttgccttcttaaaggaacgtccacctattagtttgcgttctatccaagtgaat
ggcgtcgtgaagggcttttttgaccgagataccggcgtggcgaaggaatcggattgcagc
aatgttgatgcgcttcctgcattaaccgcgacttatcgtccggtgaataattgcggcgag
cctttgcaatggtggcagaaaatactcggccaatag

KEGG   Shewanella baltica OS185: Shew185_4090
Entry
Shew185_4090      CDS       T00571                                 

Definition
(GenBank) penicillin-binding protein, 1A family
  KO
K05366  penicillin-binding protein 1A [EC:2.4.1.129 3.4.16.4]
Organism
sbm  Shewanella baltica OS185
Pathway
sbm00550  Peptidoglycan biosynthesis
sbm01100  Metabolic pathways
sbm01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:sbm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Shew185_4090
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Shew185_4090
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:sbm01003]
    Shew185_4090
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sbm01011]
    Shew185_4090
Enzymes [BR:sbm01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.129  peptidoglycan glycosyltransferase
     Shew185_4090
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     Shew185_4090
Glycosyltransferases [BR:sbm01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   Shew185_4090
Peptidoglycan biosynthesis and degradation proteins [BR:sbm01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   Shew185_4090
SSDB
Motif
Pfam: Transgly PCB_OB Transpeptidase
Other DBs
NCBI-ProteinID: ABS10207
LinkDB
Position
4870944..4873478
AA seq 844 aa
MKWLKRIVIALFSLALLGVGAIVAAYFYVLPDLPDVSTLKNVQLQTPLRIYSSDGKLISQ
FGEKRRIPLKLDEVPKPLLQAFIATEDARFYEHGGIDPVGVLRAALVMLTTGEKKQGAST
ITMQVARNFFLTRDKTIIRKVKEIFISYHIEELLTKDEILELYVNRIYLGQRAYGVGAAA
QVYFGKDVKDLTLSEMSMIAGLPKAPSTLNPVTSPSRAVARRNVVLMRMNEVGYISQAEY
QAALQEPLVAKYHGAEIDLYAPYISEMARDYMVQKYGEEEAYTNGYNVYTTISSDIQLKA
QQALRNNVYAYDERHGYRGPAAVLWTDEKPDQAQIKAELAKVASIQELQPAAVISVADQQ
ASVMTAKGETKVITWDGLKWARKFITDKRQGSVPKSASDMLKVGERIWIRDNGQYLQLSQ
VPEVASATVSLDPQNGAIRSLVGGYSFSQSQYNRVTQAKRQLGSNIKPFIYAGALEKGFT
LATLINNAPINKPDISQGTAWRPKNSPDIYGGPTRLRVGLAQSINVMSVRAMRHVGLDAT
IAELIKFGFDPNDLPRNESIALGSSSVTPLQVVTAFNVFANGGFLLEPFYIDRVEDAYGN
VIEKANPTLACKPSQSLSQPITPSDPMAFSVTGDSSTEPSAPVAQCFEQTGRFAPQIISE
QTAFLITEALKSVIWGGGDWSHGTGWQGTAWRAARLIKRHDIAGKTGTTNESRDTWFSGF
SPVLTSTFWVGFDDHGRQLGRTAWNANGEKDQITGAEAGAKTAGPGWNEFMNSVLQGTPE
TTSIPPEGIVSVRIDLATGKLTRKTDYTSAFEYFISGTEPKEYISETQDENNIFIDAPTD
DLFQ
NT seq 2535 nt   +upstreamnt  +downstreamnt
gtgaagtggttaaaacgtattgttatagcactattcagtctagcccttttgggagtaggc
gccattgtggcagcatacttttatgttttgccggatttgccggatgtttcaacactaaaa
aatgtgcaacttcaaacacctttacgcatctacagcagtgacggcaaacttatttcacaa
tttggtgagaaacgtcgcattccattgaagttagacgaagtgccaaaacccctacttcaa
gcgtttatcgcaactgaagatgcgcgtttttacgagcatggtggtatagatcctgtaggt
gtacttcgcgccgcattagtgatgttgaccacaggtgagaaaaagcaaggtgccagtacc
attaccatgcaggttgcgcgtaacttcttcttaacccgcgataaaaccattattcgtaaa
gtgaaggagatttttatctcctatcacattgaagaattactcaccaaagacgagatttta
gaactctatgtgaaccgcatttacttaggccaacgcgcctatggtgttggtgccgctgca
caagtttatttcggtaaagatgttaaagaccttacactctcagaaatgagtatgatcgcg
ggcttacccaaagcgccttcgacactcaaccctgtgacctcaccttctcgtgccgtcgct
cgccgtaatgtcgtcctcatgcggatgaatgaagtaggttacatcagccaagccgaatac
caagccgcactacaagaaccgctggtcgctaaataccacggcgccgaaattgatctctat
gcgccgtatatttctgaaatggcacgagattatatggtgcaaaagtacggagaagaagaa
gcttataccaatggctacaacgtctacacaaccatttcatcggatatacagctgaaagct
cagcaagcattacgtaataacgtttatgcctatgatgagcgtcatggctaccgtggtcct
gccgccgttctgtggacagatgaaaaaccagatcaagctcaaatcaaggctgaactggcc
aaggtggcttcaattcaagaactgcaacccgcagcagtcatcagcgtggcagatcaacaa
gccagtgtcatgaccgccaagggcgagactaaagtcattacttgggatggtttgaagtgg
gcgcgtaaatttattaccgataaacgtcaaggcagtgtacctaagtcagcttctgacatg
ctcaaggttggtgagcgtatttggatccgtgataacggccaatatttgcagttatcgcaa
gtaccagaagttgccagcgcgactgtgtcactcgacccacaaaatggtgcgattcgttct
ttagtcggcggatatagctttagccaaagccaatacaaccgcgtcactcaagcaaaacgc
caattaggttcgaacatcaaacctttcatctatgctggcgcattagagaaaggctttacc
ttagcgaccctcatcaacaatgcaccgatcaataaacccgatatcagccaaggcaccgca
tggcgccctaaaaactcgcctgatatctatggcggcccaacccgtttacgtgtgggctta
gcgcaatcaatcaacgtgatgtctgtgcgtgcaatgcgccatgtcggactcgatgccacc
attgctgaattgataaaatttggtttcgaccctaatgacctaccgcgtaacgagtcgatt
gcattaggttcgtcttcagtaacgccattacaagtggtcacggcatttaacgtgtttgct
aacggcggtttcttactcgaacctttctacatcgatcgcgtcgaagatgcctacggtaat
gtgattgaaaaagcgaatccaacattggcctgtaagcctagccaaagtcttagccaacca
attacaccgagcgatcctatggcgttcagtgtaactggagactctagtactgaaccgagt
gcacctgttgcccagtgtttcgagcaaacgggtcgctttgcaccacagatcatttcagag
caaactgcattcctcatcaccgaggcgttaaagagcgtgatctggggtggcggtgattgg
agtcacggcactggctggcaaggtacggcttggcgtgctgcaagattgattaaacgccat
gatattgcgggtaaaacaggtacaaccaacgaatctcgcgatacttggttcagtggattt
agccctgtgctcaccagtacgttctgggttggcttcgacgatcacggtcgacaactgggc
agaaccgcatggaatgccaatggtgaaaaagatcagatcaccggcgccgaagctggcgcg
aaaacggcaggtccgggttggaacgagtttatgaacagtgtcttacaaggcacacctgaa
accacatcgattccaccagaaggtattgtctcggtacgaatcgatttagcgacgggtaaa
ctcacgcgtaaaaccgactataccagtgcgttcgaatacttcatctcgggcactgagccg
aaggaatacatcagcgaaactcaggatgagaacaacatcttcatcgatgcgccaactgac
gatctattccaataa

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