Shewanella baltica OS195: Sbal195_2159
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Entry
Sbal195_2159 CDS
T00622
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
sbn
Shewanella baltica OS195
Pathway
sbn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sbal195_2159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbn03400
]
Sbal195_2159
DNA repair and recombination proteins [BR:
sbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sbal195_2159
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sbal195_2159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_22
AAA_30
DUF724
Ish1
AAA
Kinesin
UB2H
Motif
Other DBs
NCBI-ProteinID:
ABX49328
UniProt:
A9L183
LinkDB
All DBs
Position
2565500..2567506
Genome browser
AA seq
668 aa
AA seq
DB search
MSESVFQLESQFAPAGDQPTAIAKLVDGLEAGLACQTLLGVTGSGKTFTIANVIQKLGRP
TIIMAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPASNTFIEKDASVNAHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPDSYLKMLLHLRQGDVMGQRDILIRLSEL
QYKRNDIELQRGTYRVRGEVIDVFPADSERNAIRVELFDDEIERLSEFDPLTGHIIKRIA
RTTVYPKTHYVTPREKIIAATEFIKEELRERKQFLLDNNKLIEAQRIHERVQYDVEMMVE
LGYCSGIENYSRYLSGRAPGEGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKT
TLVEYGFRLPSALDNRPLKFEEFEQLMPQTIYVSATPSVYELEKSEGEIAEQVVRPTGLL
DPELEVRPVGTQVDDLLSEIAKRVAVNERVLVTTLTKRMSEDLTEYLDEHGVKVRYLHSD
IDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYADRITNSMAKAIGETDRRRERQRAHNLKHGITPKGVVKRITDVMDV
DDGRDSKAVYGKVAEPKSHYHKADATELSHQIDQLEKKMHEYARNLEFEQAAAMRDEVKH
LRDLLIKA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaatctgtttttcagcttgaatcgcaattcgcccccgcaggcgaccaacctaca
gcgatagccaaattagtcgatggactcgaagcgggtttagcttgccaaaccttactcggg
gtgaccggctcaggtaaaaccttcacgattgctaatgtaatccaaaagttaggtcgcccc
acgattattatggcgcccaataaaaccttggcggcgcagctttatggcgagatgaaagag
ttctttccccataatgcggttgagtattttgtctcttactacgattactatcagccagaa
gcctatgtgcctgcatcgaatacctttatcgagaaagatgcgtcggttaatgcccatata
gagcaaatgcgcctgtcggcgacgaaggcgctactagagcgtaaagatgtggtgctcatc
gcttctgtgtcggccatttatggtttgggcgatcccgactcctatttaaaaatgttgctg
cacctacgccaaggcgatgtgatggggcagcgtgatatcttaattcgtctcagtgaattg
cagtataaacgcaatgatatcgagctacagcgcggcacctatcgcgtgcgtggtgaagtg
attgatgttttccctgccgattctgagcgtaatgctattcgcgttgaattgttcgacgat
gagattgagcgtttaagcgagtttgatccgttaaccggccatatcattaagcgcatcgcc
cgtacaacggtttaccctaagactcactatgtgacgccgcgggaaaaaatcattgccgcc
actgagttcattaaagaagagctgcgtgagcgtaagcaatttctactcgataacaacaag
ttaattgaagcccagcgtatccatgagcgagtgcaatacgatgtggaaatgatggtggag
ttaggttactgctctggcatcgaaaactactcgcgctatttatctggtcgcgcaccgggg
gaagggccgccaaccttactcgactatttgcccgctgacggtctattaattatcgacgaa
tcccatgtgactgtgccgcaaatcggcgccatgtacaaaggtgaccgttctcgtaaaacc
acactggtggaatacggtttccgcttaccatcagccttagataaccgaccgctcaagttt
gaagagtttgagcaattgatgccgcaaaccatttatgtgtcggcgacaccgagtgtctac
gagctggaaaaaagcgaaggtgagattgccgagcaggtcgtacggccaacgggtttactc
gatcctgaattagaagtgcgtcctgtcgggactcaagtggacgatttattgtctgaaatc
gctaagcgcgtcgctgttaacgagcgggtgttagtgacgacgctgaccaagcgtatgtcg
gaggatttgactgaatacctcgacgagcatggggtcaaagtgcgttatttgcactcggac
atagacacagtcgaacgggtggagatcatccgcgatctgcgtttaggtaagtttgatgtg
ttggttgggatcaacttattgcgtgaaggcttagacatgccagaagtgtcattggtgtgt
attttagatgcggataaagagggcttcttgcgctcagaacgctcgcttatccaaaccatt
ggccgcgctgcgcgtaacgtcaatggcaaagtaatcctctatgccgatcgcattaccaat
tcgatggcgaaggccattggtgaaactgaccgccgacgtgaacgccagcgcgcgcacaac
ttaaagcacggcatcacacctaagggcgtggttaaacggatcaccgatgtgatggatgtg
gatgatggccgcgacagtaaagctgtctatggcaaagtggcagagcctaagtcccattac
cataaggctgatgcgactgagttgagccatcaaatcgatcagcttgagaagaaaatgcac
gaatatgcgcgcaacttagagttcgaacaagcagcggcgatgcgtgatgaagtcaagcat
ttgcgggacttgttgatcaaggcctag
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