Shigella boydii Sb227 (serotype 4): SBO_1950
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Entry
SBO_1950 CDS
T00301
Symbol
ycfQ
Name
(GenBank) conserved hypothetical protein
KO
K22041
TetR/AcrR family transcriptional regulator, copper-responsive repressor
Organism
sbo
Shigella boydii Sb227 (serotype 4)
Brite
KEGG Orthology (KO) [BR:
sbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbo03000
]
SBO_1950 (ycfQ)
Transcription factors [BR:
sbo03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SBO_1950 (ycfQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_11
TetR_C_17
Motif
Other DBs
NCBI-ProteinID:
ABB66540
ShiBASE_China:
SBO1950
UniProt:
Q31ZG8
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All DBs
Position
1925629..1926339
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AA seq
236 aa
AA seq
DB search
MGSGLVNGGDYFYNNLSFTVTRYNGIMATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQ
HGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVE
SALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQ
RQARGEIPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgggatctggactggtgaacggaggtgattatttttataataatctttcattcacagtc
accaggtacaacggcatcatggcaactgactcaacacaatgtgtaaaaaaaagccgtggc
cgcccaaaagtgttcgacagggatgccgcgcttgataaggccatgaaattgttctggcaa
cacggttatgaagcgacttctcttgcggacctcgtcgaagcgaccggagccaaagcgccc
acgctatacgcggaatttaccaacaaagaggggttatttcgtgccgttctcgaccgctat
atcgatcgttttgccgctaagcatgaagcacagctgttttgtgaagagaaaagcgtggag
tctgcgctggctgactattttgctgccatcgccaactgctttaccagcaaagacaccccg
gcaggctgcttcatgatcaacaactgcaccaccctctccccagattcaggagatatcgcc
aatacgttgaaatcacgccatgcgatgcaagagcgcactttgcagcagtttttatgtcaa
cgacaagcgcgcggggaaatcccgacccactgtgacgtgacacatctggcagaattcctt
aattgtattattcaggggatgtcgatcagcgcacgcgaaggtgcatcgctggaaaaacta
atgcagattgccggaacgactttgcgtttatggcccgaactggtgaaataa
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