Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101039588
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Entry
101039588 CDS
T04350
Symbol
DHX40
Name
(RefSeq) probable ATP-dependent RNA helicase DHX40 isoform X1
KO
K18711
ATP-dependent RNA helicase DHX40 [EC:
3.6.4.13
]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbq03019
]
101039588 (DHX40)
Messenger RNA biogenesis [BR:
sbq03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
101039588 (DHX40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
AAA_22
HA2_N
T2SSE
AAA_19
DUF4685
SLFN-g3_helicase
nSTAND3
AAA_30
Flavi_DEAD
RuvC_1
AAA_11
Motif
Other DBs
NCBI-GeneID:
101039588
NCBI-ProteinID:
XP_003929137
UniProt:
A0A2K6T9Z6
LinkDB
All DBs
Position
Unknown
AA seq
779 aa
AA seq
DB search
MSRFPAVAGRAPKQQEEGERSRDLQEERPSAVCIADREEKGCTSQEGGTTPTFPIQKQRK
KIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAE
EMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVIILDEAHERTL
TTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREK
FCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVD
YDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYV
VDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPD
HVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVT
RLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRH
RELATKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKL
KQQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHE
QETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDAR
RRWTNKENVKQLKDGISKDVLKKMQRRNDDKSISDARARFLERKQQRTQDHSDTRKETG
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggtttcccgctgtcgcgggcagggcgccaaagcagcaggaggagggtgagcgg
tcaagagacctccaggaagagcggccctcggctgtttgcatcgcggatagagaagagaaa
ggatgcacgtcccaggagggaggaactactccaacttttcctattcagaaacaaagaaaa
aagattattcaagctgtgagggacaattcattccttattgttactggaaatacaggaagt
ggtaaaacaactcaactcccaaaatatctgtatgaagcagggttttcacaacatggtatg
atcggtgtaactcaaccacgaaaagtagctgccatatcagttgctcagagagtagctgaa
gaaatgaaatgcactttgggatccaaagtaggataccaagttcgttttgatgattgcagc
tctaaggagacagcaatcaaatatatgactgatggatgtttactgaaacatattctggga
gatccaaatcttaccaaattcagtgtcattattttggatgaagcccatgaaagaactcta
actacagatatcttatttggtttattgaagaagctatttcaggagaagtctcctaatagg
aaggagcatttaaaagtggtggtaatgtcagcaactatggaattagccaagctctctgca
ttctttggaaattgtccgatatttgatatacctggaaggctttatccagtcagagagaaa
ttctgcaatttgattggcccacgagaccgagaaaatactgcatatattcaagcgattgtg
aaagtgaccatggatatccatttgaatgaaatggctggagacatcttggtttttctgact
ggccagtttgaaattgaaaaaagctgtgagttactttttcagatggcagagtctgttgat
tatgattatgacgttcaagataccacccttgatggcttgttaatattgccatgttatgga
tctatgacaacagatcaacagaggagaatatttttgccacctccacctggaattagaaaa
tgtgtcatatccaccaatatttctgcaacatctttgacaatagatggaatcagatatgtg
gtagatggtggctttgtgaaacagttaaatcacaaccccagattagggttggacatcctg
gaggtggttccaatttcaaagagtgaggcattacagcgaagtggccgagctggcaggact
tcttcaggaaagtgctttcggatctatagtaaagatttttggaaccagtgtatgcctgac
catgtgatccctgaaattaagagaactagtttgacatctgtagttctgaccttaaagtgc
cttgccatacacgatgtcataaggtttccctatttggatccacctaatgagagacttatt
ttggaagctcttaaacaactttaccagtgtgatgctattgacaggagtggccatgtgacc
agattgggtttgtctatggtggagtttcctttgcctccacatctgacatgtgcggtaata
aaagctgcttccctggattgtgaagatctactacttccaatagcagcaatgttgtcggtg
gaaaacgtcttcattagacctgttgatccggagtaccagaaggaagcagaacagagacat
cgagaattggcaactaaagctggaggatttaatgactttgcaactttagctgtcatcttt
gaacaatgcaaatcaagtggagctccagcttcgtggtgccaaaaacactggattcactgg
aggtgcttattttctgcatttcgtgtggaagcccaacttcgagaactaattaggaagctt
aaacagcaaagtgatttcccaagagagacctttgagggccctaaacatgaagtactacga
agatgtctctgtgcaggctatttcaaaaatgtagctcgaagatctgttgggagaacgttt
tgcacaatggatgggcgtggaagcccggttcacattcatccttcctcagcacttcatgaa
caggaaaccaaacttgaatggatcatttttcatgaagtattggttaccaccaaagtctac
gcaagaattgtatgcccaattcgttatgaatgggtaagagacttgttacccaagttgcat
gaatttaatgcacatgatttgagcagtgtggcccgacgtgaagtgagagaagacgcaaga
aggagatggacaaataaggaaaatgtaaaacagttaaaggatggaatatcaaaagacgtc
ctaaagaaaatgcaaagaagaaatgatgacaaatccatatctgatgcacgggctcgtttc
cttgagagaaagcagcagaggacccaagaccacagtgatacacggaaagaaacaggctaa
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