KEGG   Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101042480Help
Entry
101042480         CDS       T04350                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
sbq  Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sbq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    101042480 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbq03400]
    101042480 (LIG4)
Enzymes [BR:sbq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     101042480 (LIG4)
DNA repair and recombination proteins [BR:sbq03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     101042480 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV BRCT DNA_ligase_A_C BRCT_2 RNA_ligase APG17 mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID: 101042480
NCBI-ProteinID: XP_010337132
UniProt: A0A2K6SBK8
LinkDB All DBs
Position
Unknown
AA seq 911 aa AA seqDB search
MAASQTSQTVASHVPFADLCSTLERIQKTKGRAEKIRYFREFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYRTPTGTHG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDLLDSVASNNSAKRKDLVKKSLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTIFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIEHIEKDMRHQTFYIETKLDGERMQMHKDGDVYKYFSRNGYNYTD
QFGASPAEGSLTPFIHNAFQTDTQICILDGEMMAYNPNTQTFMQKGIKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRSEILSSIFTPIPGRIEIVQKTQAHTKDEVIDALNE
AIDKREEGIMIKYPLSIYKPDKRGEGWLKIKPEYVSGLMDELDIIIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGKKPSVFHTLSRVGSGYTMKELYDLGLKLAKYWRPFHKKTPPSSILC
GSEKPEVYIEPCNSVIVQIKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLE
QLRGKACGKLASKHLYIGGDDGPPEKKRKAPPKIKKVIGIIEHLKAPNLTNVNKISNIFE
DVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIILSDKHDV
VKPAWLLECFKTKSFVPWQPCFMIHMCPSTKEHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNSNEQTPEEMASVIADLEHRYSWDRSPLSIFRRHTIYLDLYAVINDLSTKTEGTRLAV
KALELRFHGGTVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFKILKDSWITDSIDK
YELQEESQYLI
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggctgcctcacaaacttcgcaaactgttgcatctcacgttccttttgcagatttgtgt
tcaactttagaacgaatacagaaaactaaaggacgtgcagaaaaaatcagatactttagg
gaatttttagattcttggagaaaatttcatgatgctcttcataagaaccaaaaagatgtc
acagactctttttatccagcaatgaggctaattcttcctcagctagaaagagagagaatg
gcctatggcattaaagaaactatgcttgctaagctttatattgaattgcttaatttacct
agagatggaaaagatgccctcaaacttttaaactacagaacacccactggaactcacgga
gatgctggagactttgcaatgattgcatattttgtgttgaagccaagatgtttacagaaa
ggaagtttaaccatacagcaagtaaatgaccttttagactcagttgccagcaataattct
gctaaaagaaaagacctagtaaaaaagagtcttcttcaacttataactcagagttcggca
cttgagcaaaagtggcttattcggatgatcataaaggatttaaagcttggtgttagtcag
caaactatcttttctgtttttcataatgatgctgctgagttgcataatgtcactacagat
ctggaaaaagtctgtaggcaactgcatgatccttctgtaggactcagtgatatttctatc
actttattttctgcctttaaaccaatgctagctgctattgcagatattgagcacatcgag
aaggatatgagacatcagactttctacatagaaaccaagctagatggtgaacgtatgcaa
atgcacaaagatggggatgtgtataaatacttctcccgaaatggatataactatactgat
cagtttggtgcttctcctgctgaaggttctcttaccccattcattcataatgcattccaa
acagatacacaaatctgtattcttgatggtgagatgatggcctataatcctaatacacag
actttcatgcaaaagggaattaagtttgatattaaaagaatggtagaagattctgatctg
cagacttgttattgtgtttttgatgtattgatggttaataataaaaagctagggcatgag
actctgagaaagaggtctgagattcttagtagtatttttacaccaattccaggtagaata
gaaatagtgcagaaaacacaagctcatactaaggatgaagtcattgatgcattgaatgaa
gcaatagataaaagagaagaaggaatcatgataaaatatcctctgtccatctacaagcca
gacaaaagaggtgaagggtggttaaaaattaaaccagaatatgttagtggactaatggat
gaattggacattataattgttggaggatattggggtaaaggatcacggggtggaatgatg
tctcattttttgtgtgcagtagcagagaagccccctcctggtaaaaagccatctgtgttt
catactctctctcgtgttggctctggttataccatgaaagaactgtatgatctgggtttg
aaattggccaagtactggaggccttttcataaaaaaactccaccaagtagcattttatgt
ggatcagagaagccagaagtgtacattgaaccttgtaattctgtcattgttcagattaag
gcagcagagatagtacccagtgacatgtataaaactggttgtaccttgcgttttccacga
attgagaagataagagatgacaaagagtggcatgagtgcatgacactggatgacctagaa
cagcttaggggaaaagcatgtggaaagcttgcatctaaacacctttatataggtggtgat
gatggaccaccagaaaaaaagcggaaagctcccccaaagataaagaaagtcattggaatt
attgagcacttaaaagcacctaaccttactaatgtaaacaaaatttctaatatatttgaa
gatgtggagttttgtgttatgagtggaacagatagccagccaaaacctgacctggagaac
agaattgcagaatttggtggttatatagtacaaaacccaggcccagacacatattgtgta
attgcagggtctgagaacatcagagtgaaaaacataattttgtcagataaacatgatgtt
gtcaagcctgcatggcttttagaatgttttaagaccaaaagctttgtgccatggcagcct
tgctttatgattcatatgtgcccatcaaccaaagaacatttcgcccgtgaatatgattgc
tatggtgatagttattttgttgatacagacttgaaccaactgaaggaagtattctcagga
attaagaattctaacgagcagactcctgaagaaatggcttctgtgattgctgatttagaa
catcggtattcctgggatcgctctcctctcagtatatttcgacgccacaccatttatttg
gacttgtatgctgttattaatgacctgagtaccaaaactgaggggacaagattagctgtt
aaagctttggagcttcgatttcatggaggaacagtagtttcttgtttagctgagggagtg
tctcatgtaatcattggtgaagatcatagtcgtgttgcagattttaaagcttttagaaga
acttttaagagaaagtttaaaatcctaaaagacagttggataactgattcaatagacaag
tatgaactacaagaagaaagccaatatttgatttaa

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