KEGG   Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101042658Help
Entry
101042658         CDS       T04350                                 

Gene name
SETDB1
Definition
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X2
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
sbq  Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq00310  Lysine degradation
sbq04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:sbq00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    101042658 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    101042658 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sbq03036]
    101042658 (SETDB1)
Enzymes [BR:sbq01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     101042658 (SETDB1)
Chromosome and associated proteins [BR:sbq03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     101042658 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101042658 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: SET DUF5604 Tudor_4 TUDOR_5 Pre-SET MBD DUF4537 53-BP1_Tudor Chromo
Motif
Other DBs
NCBI-GeneID: 101042658
NCBI-ProteinID: XP_003941999
LinkDB All DBs
Position
Unknown
AA seq 1297 aa AA seqDB search
MSSLPGCIGLDAATATVESEEIEELQQAVVEELGISMEELRHFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDESSRPT
EIIEIPDEDDDVLSIDSGDAGNRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYVTAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTGTGTQFKPVEPPQPTAPPAPPFPPAPPLSPQAGDSDLESQ
LAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVSGGKPGINQTYRSPLGSTASAPAP
SAPPAPPAPPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRNEQ
YRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFL
FLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIP
GKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQVNPNSGYQYKRLEEC
LPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYA
GKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNS
GTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSRPPDLG
PPHIPVPPSIPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSHSFKTNEGGEGRA
GGSRMEAEKASTSGLGIKDEGDIKQAKKEDPDDRNKMSVVTESSRNYGYNPSPVKPEGLR
RPPSKTSMHQSRRLMASAQSNPDDVLTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQ
TISSGSEGDDFEDKKNMTGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVDKGESAPVR
KNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKR
IRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3894 nt NT seq  +upstreamnt  +downstreamnt
atgtcttcccttcctgggtgcattggtttggatgcagcaacagctacagtggagtctgaa
gagatcgaagagctgcaacaggcagtggttgaggagctgggtatctctatggaagaactt
cggcatttcatcgatgaggaactggagaagatggattgtgtacagcagcgcaagaaacag
ctggcagagttagagacatgggtaatacagaaagaatctgaggtggctcatgttgaccag
ctctttgatgatgcatctcgggcagtgactaattgtgagtctttggtgaaggacttctac
tcgaagctgggactacaataccgggacagtagctctgaagatgaatcttcccggcctaca
gaaataattgagattcctgatgaagacgatgatgtcctcagtattgattcaggtgatgct
gggaacagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaagatgttcagaagttcatggatgctgtcaacaagaagagtagttcccaggatctg
cataaaggaaccttgagtcagatgtctggagaactaagcaaagatggtgacctgatagtc
agcatgcgaattctgggcaagaagagaactaagacatggcacaaaggcactcttattgcc
atccagacagttgggccagggaagaagtacaaggtgaaatttgacaacaaaggaaagagt
ctactgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtttgtg
ggcagtcgggtggtcgccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgatggc
tatgcttcctatgtcacacagtctgaactgtatcccatttgccggccactgaaaaagact
tgggaagacatagaagacatctcctgtcgtgacttcatagaggagtatgtcactgcctac
cccaaccgccccatggtactgctcaagagtggccagcttatcaagactgagtgggaaggc
acatggtggaagtcccgagttgaggaggtggatggcagcctagtcaggatcctcttcttg
gatgacaaaagatgtgagtggatctatcgaggctctacacggctggagcccatgttcagc
atgaaaacatcctcagcctctgcactggagaagaagcaaggaggacagctcaggacacgt
ccaaacatgggtgctgtgaggagcaaaggccctgttgtccaatacacacaggatctgact
ggtactggaacccagttcaaaccagtggaacccccacagcctacagctccacctgcccca
cctttcccacctgctccacctctgtccccccaagcaggtgacagtgatttggaaagccag
cttgcccagtcacggaagcaggtagccaaaaagagcacatccttccgaccaggatctgtg
ggctctggtcattcctcccctacgtctcctgcactcagtgaaaatgtctctggtggtaaa
cccgggatcaaccagacatacagatcacctttaggctccacagcctctgccccagcaccc
tcagcacccccagcccctccagcacccccagcccctccagcacccccagccttccatggc
atgctggagcgggccccagcagagccctcctaccgtgctcccatggagaagcttttctac
ttacctcatgtctgcagctatacctgtctgtctcgagtcagacctatgaggaatgagcag
taccggggcaagaaccctctgctggtcccattactgtatgactttcggcggatgacagcc
cggcgtcgagttaaccgcaagatgggctttcatgttatctataagacaccttgtggtctg
tgccttcggacaatgcaggagatcgaacgctacctttttgagactggctgtgacttcctc
ttcctggagatgttctgtttggatccatacgttcttgtggaccgcaagtttcagccctat
aagcctttctactatattttggacatcacctatgggaaggaagatgttcccctatcctgc
gttaatgagattgacacaacccctccaccccaggtggcctacagcaaggaacgtatcccg
ggcaagggtgttttcattaacacaggccctgaatttctggttggctgtgactgcaaggat
gggtgtcgggacaagtccaagtgtgcctgccatcagctaactatccaggctacggcctgt
accccaggaggccaagtcaaccctaactctggctaccagtacaagagattagaagagtgt
ctgcccacaggggtatatgagtgtaacaaacgctgcaaatgtgacccgaacatgtgcaca
aaccggttggtgcaacatggactgcaagttcggctacagctattcaagacgcagaacaag
ggctggggtatccgctgcttggatgacattgccaaaggctcttttgtctgtatttatgca
ggcaaaatcctgacagatgactttgcagacaaagagggtctggaaatgggtgatgagtac
tttgcaaatctggatcatatcgagagtgtggagaacttcaaagaaggatatgagagtgat
gccccctgttcctctgacagcagtggtgtagacttgaaggaccaggaagatggcaacagc
ggtacagaggaccctgaagagtctaatgacgatagctcagatgataacttctgtaaggat
gaggacttcagcaccagttcagtatggcggagctatgccacccggagacagacccggggc
cagaaagagaacggactctctgagacagcttccaaggactcccgccccccagatcttgga
cccccacatattcctgttcccccctccatccctgtaggtggctgtaatccaccttcctct
gaagagacacccaagaacaaggtggcctcgtggttgagctgcaatagtgtcagtgaaggt
ggttttgctgactctgatagccattcctttaagactaatgaaggtggggagggccgggcc
gggggaagccgaatggaggctgagaaggcctctacctcaggactgggcatcaaggatgag
ggagacatcaagcaggccaagaaagaggaccctgacgaccgaaacaagatgtcagtggtt
actgaaagctctcgaaattacggttacaatccttctcccgtgaagcctgaaggacttcgc
cgcccacctagtaagactagtatgcatcaaagccgacgactcatggcttctgctcagtcc
aaccctgatgatgtcctgaccctgtccagcagcacagaaagtgagggggaaagtgggacc
agccgaaagcccactgctggtcagacttcggctacggcggttgacagtgatgatatccag
accatctcctctggctctgaaggggatgactttgaggacaagaagaacatgactggtcca
atgaagcgtcaagtggcagtaaaatcaacccgaggctttgctcttaaatcaacccatggg
attgcaattaaatcaaccaacatggcctctgtggataagggggagagtgcacctgttcgt
aagaacacacgccagttctatgatggcgaagagtcttgctacatcattgatgccaagctt
gaaggcaatctgggacgctacctcaaccacagttgcagccccaacctgtttgtccagaat
gtcttcgtggatacccatgatcttcgcttcccgtgggtggccttctttgccagcaaaaga
atccgggctgggacagaacttacttgggactacaactacgaggtgggcagtgtggaaggc
aaggagctgctctgttgctgcggggccattgagtgcagaggacgtcttctttag

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