Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101044233
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Entry
101044233 CDS
T04350
Gene name
DDX58
Definition
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
3.6.4.13
]
Organism
sbq
Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq04064
NF-kappa B signaling pathway
sbq04622
RIG-I-like receptor signaling pathway
sbq04623
Cytosolic DNA-sensing pathway
sbq05160
Hepatitis C
sbq05161
Hepatitis B
sbq05162
Measles
sbq05164
Influenza A
sbq05168
Herpes simplex virus 1 infection
sbq05169
Epstein-Barr virus infection
sbq05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
sbq00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101044233 (DDX58)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101044233 (DDX58)
04623 Cytosolic DNA-sensing pathway
101044233 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
101044233 (DDX58)
05160 Hepatitis C
101044233 (DDX58)
05171 Coronavirus disease - COVID-19
101044233 (DDX58)
05164 Influenza A
101044233 (DDX58)
05162 Measles
101044233 (DDX58)
05168 Herpes simplex virus 1 infection
101044233 (DDX58)
05169 Epstein-Barr virus infection
101044233 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sbq04054
]
101044233 (DDX58)
Enzymes [BR:
sbq01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
101044233 (DDX58)
Pattern recognition receptors [BR:
sbq04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
101044233 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_22
AAA_25
Syntaxin_2
PhoH
Peptidase_S51
Motif
Other DBs
NCBI-GeneID:
101044233
NCBI-ProteinID:
XP_003939778
UniProt:
A0A2K6U9E4
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MTAEQRRSLGAFRDYIRKTLDPTYILSYMAPWIREEEVQYIQAEKNNKGPMEAATLFLKI
LLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFQKIEKLEEYRLLLKRLQPEFKSRIIP
IDILPDLSECLINQECEEITQICSTKGMMAGAEKLVECLLRSDKENWPKTLKFALEKERN
KFSELWIIEKGIKDVETEDLEEKMETSDIQIFYQEDPECQNLSENSCLPSEVSDTDLYSP
FKLRSYQLELALPAKKGKNTIICAPTGCGKTFVALLICEHHLKKFPQGQKGKVVFFANQI
PVYEQQKSVFSKYFERLGYRVTGISGATADNAPVKQMVENNDIIILTPQILVNNLKNGTI
PSLSVFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKST
DEALDYICKLCASLDASVIATVRDNLEELEQVVYKPQKFFRKVESRINDKFKCIIAQLMR
ETESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL
YTSHLRKYNDALIINEDARMKDALHYLKDFFSNVRAAGFDETEQDLTQRFEEKLQELESV
SRDPSNENPKLEDLCFILREEYHLNPETITILFVKTRALVDALKNWIEGNPQLSFLKPGI
LTGRSKTNQNTGMTLPAQKCILDSFKAHGDHNILIATSVADEGIDIAQCNLVILYEYVGN
VIKMIQTRGRGRARGSKCFLLTSSAAVIEKENINMYKETMMNDSILRLQTWDEAEFKEKI
LHIQIHEKFIRDSQEKTKPVPDKENKKLLCRKCKAFACYTADIRVIEESHYTVLGDAFKE
CFVSRPHPKPTQFSNFHKRAKIFCARRDCSHDWGIHVKYKTFEIPVIKMESFVVEDIATG
VQTLYSKWKDFHFEKIPFDAAEMSTISEPQPSASGNE
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgagcagcggcgcagcctgggcgccttccgcgattacatccggaagaccctg
gaccctacctacatcctgagctacatggccccctggattagggaggaagaggtgcagtac
attcaggctgagaaaaacaacaagggcccaatggaggctgccacactttttctcaagatc
ctgttggagctccaggaggaaggctggttccgtggctttttggatgccctagaccacgca
ggttattctggactttatgaagccattgaaagttgggatttccaaaaaattgaaaagttg
gaggagtatagattacttttaaaacgtttacaaccagaatttaaaagtagaattattcca
atagatatccttcctgatctatctgaatgtttaattaatcaggagtgtgaagaaattaca
cagatttgctccactaagggaatgatggcaggtgcagagaaattggtggaatgccttctc
agatcagacaaggagaactggcccaaaactttgaaatttgctttggagaaagaaaggaac
aaattcagtgagctgtggattatagagaaaggtataaaagatgtggaaacagaagatctt
gaggagaagatggaaacttctgacatacagattttctaccaagaagatccagaatgccag
aaccttagtgagaattcatgtctgccttcagaagtgtctgatacagacttgtacagccca
tttaaactaagaagttaccaattagagcttgctttgcctgccaagaaaggaaaaaacaca
ataatatgtgctcccacaggttgtggaaaaacctttgttgcactccttatatgtgaacat
catcttaaaaaattccctcaaggacaaaaggggaaagttgtcttttttgctaatcagatc
ccagtgtatgaacagcagaaatctgtattctcaaaatactttgaaagacttgggtataga
gttacaggcatttctggagcaacagctgataatgccccagtgaaacagatggttgagaac
aacgacatcatcattttaactccacagattcttgtgaacaaccttaaaaatggaacgatt
ccatcactgtccgtcttcactttgatgatatttgatgaatgccacaacactagtaaacaa
catccatacaatatgatcatgttcaattatctagatcagaaacttggaggatcttcaggc
ccactgccccaggtcattgggctgactgcctcggttggtgttggggatgccaaaagcaca
gatgaagctttggattatatctgcaagctgtgtgcttctcttgatgcgtcagtgatagca
acagtccgagacaacctggaggaactggagcaagttgtttataagccccagaagtttttc
aggaaagtggaatcacggattaacgacaaatttaaatgcatcatagctcagctgatgagg
gagacagagagtctggcaaagagaatctgcaaagacctcgaaaacttatctcaaattcaa
aatagggaatttggaacacaaaaatatgaacaatggattgttacagttcagaaagcatgc
atggtgttccagatgccagacaaagatgaggagagcaggatttgtaaagccctgtttttg
tacacttcacatttgcggaaatataatgatgccctcattattaatgaggacgcacgaatg
aaggatgctctgcattacttgaaagacttcttcagcaatgtccgggcagcaggattcgat
gagactgaacaagatcttactcagagatttgaagaaaagctgcaggaactcgaaagtgtt
tccagggatcccagcaatgagaaccctaaactcgaagacctttgcttcatcttacgagaa
gagtaccacttaaacccagagacaataacaattctctttgtgaaaaccagagcacttgtg
gatgctttaaaaaattggattgaaggaaatcctcaactcagttttctaaaacctggcata
ttgactggacgtagcaaaacaaatcagaacacaggaatgactctcccagcacagaagtgt
atattggattcatttaaagcccacggagatcacaatattctgattgccacctcagttgct
gatgaaggcattgacattgctcagtgcaatcttgtcatcctgtatgagtatgtgggtaat
gtcatcaaaatgatccaaaccagaggtagaggaagagcaagaggtagcaagtgcttcctt
ctgaccagtagtgctgctgtaattgaaaaggagaacataaacatgtacaaagaaacaatg
atgaatgactccattttacgccttcagacatgggatgaagcagaatttaaggaaaagatt
ctgcatatacagattcatgaaaaattcatcagagatagtcaagagaaaacaaaacctgta
cctgataaggaaaataaaaaactgctttgcagaaagtgcaaagcctttgcatgttacaca
gctgacataagagtgatagaggaatcccattacactgtgcttggtgatgcttttaaggaa
tgctttgtgagtagaccacatcctaaaccaacacagttttcaaattttcataaaagagca
aagatattctgtgcccgacgggactgcagccatgactggggaatccatgtgaagtacaag
acatttgagattccagtaataaaaatggaaagttttgtggtggaggacattgcaactgga
gttcagacactgtattcaaagtggaaggactttcattttgagaagataccatttgatgca
gcagaaatgtccacgatatcagagcctcaaccttcagcttccgggaatgagtaa
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