KEGG   Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101047177
Entry
101047177         CDS       T04350                                 

Gene name
DDB1
Definition
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
sbq  Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq03420  Nucleotide excision repair
sbq04120  Ubiquitin mediated proteolysis
sbq05161  Hepatitis B
sbq05170  Human immunodeficiency virus 1 infection
sbq05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:sbq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101047177 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101047177 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    101047177 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    101047177 (DDB1)
   05161 Hepatitis B
    101047177 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sbq04121]
    101047177 (DDB1)
   03400 DNA repair and recombination proteins [BR:sbq03400]
    101047177 (DDB1)
Ubiquitin system [BR:sbq04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     101047177 (DDB1)
DNA repair and recombination proteins [BR:sbq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101047177 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101047177 (DDB1)
SSDB
Motif
Pfam: MMS1_N CPSF_A Beta_propel
Other DBs
NCBI-GeneID: 101047177
NCBI-ProteinID: XP_010333656
UniProt: A0A2K6SFA0
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcgtacaactacgtggtaactgcccagaagcccaccgccgtgaacggctgcgtgacc
ggacactttacttcagctgaagacttaaacctgttgattgccaaaaacacaaggttagag
atttatgtggtcaccgccgaggggcttcggcccgtcaaagaggtgggcatgtacgggaag
attgcggtcatggagcttttcaggcccaagggggagagcaaggacctgctgtttatcttg
acagcaaagtacaatgcctgcatcctggagtataagcagagtggcgaaagcattgacatc
atcacacgagcccatggcaacgttcaggaccgcattggccgcccctcagagactggcatt
attggcatcattgacccagagtgccggatgattggcctgcgtctctatgatggccttttc
aaggttattccactagatcgcgataataaagaactcaaggccttcaacatccgcctggag
gagctgcatgtcattgatgtcaagttcctatatggttgccaagcacctactatttgcttt
gtctaccaggaccctcaggggcggcatgtgaaaacctatgaggtgtctctccgagagaag
gagttcaataagggcccttggaaacaggaaaatgtagaagctgaagcttccatggtgatc
gcagtcccagagccctttggaggggccatcatcattggacaggagtcaatcacctatcac
aatggtgacaaatacctggctattgctcctcctatcatcaagcaaagcaccattgtgtgc
cacaatcgagtggaccctaatggctcaagatacctgctgggagacatggaaggcagactt
ttcatgctgcttttggagaaggaggaacagatggatggcactgtcactctcaaggatctc
cgtgtagaactcctgggagagacctctattgctgagtgcttgacataccttgataatggt
gttgtgtttgtcgggtctcgcctgggtgactcccagcttgtgaagctcaatgttgacagt
aatgaacaaggctcctacgtagtggccatggaaaccttcaccaacttaggacccattgtg
gatatgtgtgtggtggacctggagaggcaggggcaggggcagctggtcacttgctctggg
gctttcaaggaaggttccttgcggatcatccggaatggaattggaattcatgagcatgcc
agcattgacttaccaggcatcaaaggattatggccactgcggtctgaccctaatcgtgag
actgatgacactttggtgctctcttttgtgggccagacaagagttctcatgttaaatgga
gaggaggtagaagaaaccgaactgatgggtttcgtggatgatcagcagactttcttctgt
ggcaacgtggctcatcagcagcttatccagatcacttcagcatcagtaaggttggtctct
caagaacccaaagctctggtcagtgaatggaaggagcctcaggccaagaatatcagtgtg
gcctcctgcaacagcagccaggtggtggtggctgtgggcagggccctctactacctgcag
atccatcctcaggagctccggcagatcagccacacagagatggaacatgaagtggcctgc
ttggacatcaccccattaggggacagcaatggactgtcccctctttgtgccattggcctc
tggacagacatctcggctcgtattttgaagctgccttctttcgaactactgcacaaggag
atgttgggtggagagataattcctcgctccatcctgatgaccacctttgagagtagccac
taccttctttgtgccttgggagatggagcacttttctactttgggctcaacattgagaca
ggtctgttgagtgaccgtaagaaggtgactctaggcacccagcccactgtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctat
agcagcaaccacaaattggtcttctcaaatgtcaacctcaaggaagtgaactacatgtgt
cctctcaattcggatggctatcctgacagcctggcactggccaataatagcaccctcacc
atcggcaccatcgatgagatccagaagctacacattcgcacagttcccctctatgagtct
ccgaggaagatctgctaccaggaagtatcccaatgttttggggtcctctccagccgcatt
gaagtccaagacactagtgggggcacaacagctttgaggcccagtgctagcacccaggct
ctgtccagcagtgtcagctccagcaagctattctccagcagtacagctcctcatgagacc
tcctttggagaagaggtggaggtgcacaacctacttatcattgaccaacatacctttgaa
gtgcttcatgctcaccagtttctacagaatgaatatgccctcagcctggtctcctgcaaa
ctgggcaaagaccccaacacttacttcattgtgggcacagcaatggtgtatcctgaagag
gcagagcccaagcagggtcgcattgttgtctttcagtattcggatggaaaactacagact
gtggctgaaaaggaagtgaaaggggccgtgtactctatggtggaatttaacgggaagctg
ttagccagcatcaatagcacggtgcggctctatgagtggacagcagagaaggagcttcgc
actgaatgcaaccactacaacaacatcatggcgctctacctgaagaccaagggtgacttc
atcctggtgggcgacctcatgcgctcagtgctgctgcttgcttataagcccatggaagga
aactttgaagagattgctcgagactttaatcccaactggatgagtgctgtggaaatcttg
gatgatgacaattttctgggggctgaaaatgcttttaacttgtttgtgtgtcaaaaggac
agcgctgccaccactgacgaggagcggcagcaccttcaggaggttggtcttttccacctg
ggcgagtttgtcaatgtcttttgccatggctctctggtaatgcagaatctgggtgagact
tccacccccacacaaggctcggtgctcttcggcacggtcaatggcatgataggtctggtg
acctcactgtcagagagctggtacaacctcctgttggacatgcagaatcgactcaataaa
gtcatcaaaagtgtgggcaagattgagcactccttctggagatcctttcacaccgagcgg
aagacagaaccagccacaggcttcatcgatggtgacttgattgagagtttcctggatatc
agccgccccaagatgcaagaggtggtggcaaacctgcagtatgatgatggcagcggtatg
aagcgagaagccactgcagacgacctcatcaaggttgtggaggagctaactcggatccat
tag

DBGET integrated database retrieval system