KEGG   Saimiri boliviensis boliviensis (Bolivian squirrel monkey): 101053695Help
Entry
101053695         CDS       T04350                                 

Gene name
HDAC6
Definition
(RefSeq) histone deacetylase 6 isoform X2
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
sbq  Saimiri boliviensis boliviensis (Bolivian squirrel monkey)
Pathway
sbq05034  Alcoholism
sbq05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:sbq00001]
 09160 Human Diseases
  09161 Cancers: Overview
   05203 Viral carcinogenesis
    101053695 (HDAC6)
  09165 Substance dependence
   05034 Alcoholism
    101053695 (HDAC6)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sbq01009]
    101053695 (HDAC6)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbq03019]
    101053695 (HDAC6)
   04131 Membrane trafficking [BR:sbq04131]
    101053695 (HDAC6)
   03036 Chromosome and associated proteins [BR:sbq03036]
    101053695 (HDAC6)
Enzymes [BR:sbq01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     101053695 (HDAC6)
Protein phosphatases and associated proteins [BR:sbq01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101053695 (HDAC6)
Messenger RNA biogenesis [BR:sbq03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     101053695 (HDAC6)
Membrane trafficking [BR:sbq04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    101053695 (HDAC6)
Chromosome and associated proteins [BR:sbq03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     101053695 (HDAC6)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var RAMPs
Motif
Other DBs
NCBI-GeneID: 101053695
NCBI-ProteinID: XP_003939595
UniProt: A0A2K6T2X8
LinkDB All DBs
Position
Unknown
AA seq 1213 aa AA seqDB search
MTSTGQDSTTTRQRRSRQNPQSSPQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLG
QAIEEDLIVGLQGMDLNLEAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLI
QEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMKEGELRVLADTYDSVYLHPNS
YSCACLATGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQ
KHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQG
QGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATP
AGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPMLESPGAPCRSA
QASVSCALEALEPFWEVLVRSTDTVEGDNVEEDNVEENEDEGPWEPPVLPILTWPVLQFR
TGLVYDQSMMNHCNLWDSHHPEVPQRILRIMCRLEELGLAGRCLTLPPRPATEAELFTCH
SAEYIARLRATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRLVEAVLSGEVLN
GAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHMF
EDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRIGDADYLAAWH
RLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEG
GYNLTSISESMAACTRSLLGDPPPLLTLPRPPLSGALASITETIQVHRRYWRSLRVMKVE
DKEGPSSSKLITKKAPQPAKPTLAEQMLTREKKVLEASMGKAISLSREESTADQIKSETA
VVAVTQDQSSEAAMGGATPAQTISKAAIGGAMLGQTTSEEAVGGATPDHTTSEETVGGAT
LDQTTSEDAVRGATLAQTTSEAVGGATLAQTTSEAAMEGATLDQTTSEEALGGTELIQTP
LTLSTDHQRPPTSPVQGTTPQIPPSTLIGSLRTLELGSESQGALESQAPGEENLLGEAAG
GQDMADSMLMQGSKGLTDQAIFYAVTPLPWCPHLVAVCPIPAAGLDVTQPCGDCGTIQEN
WVCLSCYQVYCGRYINAHMLRHHGNSGHPLVLSYVDLSTWCYYCQAYVHHQALLDVKNIA
HQNKFGEDMPHPY
NT seq 3642 nt NT seq  +upstreamnt  +downstreamnt
atgacctcaaccggccaggattccaccacaaccaggcagcgaagaagtaggcagaacccc
cagtcgtcccctcaggactccagtgtcacttcgaagcgaaacattaaaaagggagccgtt
ccccgctccatccccaatctagcagaggtaaagaaaaaaggcaaaatgaagaagctcggc
caagcaatcgaagaagacctaatcgtgggactgcaggggatggatctgaaccttgaggct
gaagcactggctggcactggcttggtgttggatgagcagctaaatgaattccattgcctc
tgggatgacagcttcccggaaggccctgagcggctccatgccatcaaggagcaactgatc
caggagggcctcctagatcgctgtgtatcctttcaggcccggtttgctgaaaaggaagag
ctgatgttggttcacagcctagaatatattgatctgatggaaacaacccagtacatgaag
gagggagaactccgcgtcctagcagacacctatgactcagtttatcttcatccgaactca
tactcctgtgcctgcctggccactggctctgtcctcaggctggtggatgcggtcctaggg
gctgaaatccggaatggcatggccatcattaggcctcctggacatcacgcccaacacagt
cttatggatggctattgcatgttcaaccacgtggctgtggcagcccgctatgctcaacag
aaacaccgcatccggagggtccttatcgtggattgggatgtgcaccatggtcaaggaaca
cagttcaccttcgaccaggaccccagtgtcctctatttctccatccaccgctacgagcag
ggtaggttctggccccacctgaaggcctctaactggtccaccacaggttttggccaaggc
caaggatataccatcaatgtgccttggaaccaggtggggatgcgggatgctgactacatt
gctgctttcctgcacgtcctgctgccagttgcccttgagttccagcctcagctggtcctg
gtggctgctggatttgatgccctgcaaggggaccccaagggtgagatggccgccactcca
gcagggttcgcccagctaacccacctgctcatgggtctggcaggaggcaagctgatcctg
tctctggagggtggctacaacctccgtgccctggctgaaggtgtcagtgcttcgcttcac
acccttctgggagatccttgccccatgctggagtcccctggtgccccctgccggagtgcc
caggcttcagtttcctgtgccctggaagcccttgagcccttctgggaggttcttgtgaga
tcaactgataccgtggaaggggacaacgtggaggaggacaatgtagaggagaacgaagat
gaaggaccctgggagcccccagtgcttccaatcctgacatggccggtgctacagtttcgc
acagggctggtctatgaccagagtatgatgaatcactgcaacttgtgggacagccaccac
cctgaggtaccccagcgcatcttgcggatcatgtgccgtctagaggagctgggacttgct
gggcgctgcctcaccttgccaccgcgccccgccacagaggctgagctgttcacctgccac
agtgctgagtatatagctcgtctccgggccacagagaagatgaaaacccgggagctgcac
cgggagagttccaactttgactccatctacatctgccccagcacctttgcctgtgcacag
cttgccactggtgctgcctgccgcctggtggaggctgtgctctcaggagaggttctgaat
ggtgctgctgtggtgcgtcccccaggacaccatgcggagcaggacgcagcttgcggtttt
tgctttttcaactctgtggctgtggctgctcgccatgcccaggctatcagtgggcatgcc
ctgcggatcctgatcgtggattgggatgtccaccatggtaatggaactcagcacatgttt
gaggacgatcccagtgtactgtatgtgtccctgcaccgctacgatcatggcaccttcttc
cccatgggagatgagggtgccagcagccagatcggccgggctgcaggcacaggcttcacc
gtcaacgtggcatggaatgggccccgcataggtgatgctgactacctagctgcctggcat
cgcctggtgcttcctatcgcatacgagtttaacccagaactggtgctggtctcagctggc
tttgacgctgcacggggggacccgctggggggctgccaggtgtcacctgagggttacgcc
cacctcacccacctgctgatgggccttgccagtggccgcattatccttatcctagagggt
ggctataacctgacatccatctcagagtccatggctgcctgcactcgctccctccttgga
gacccaccacccctgctgaccctgccacggcccccactatcaggggccctggcctcaatc
actgagaccatccaagtccatcgcagatactggcgcagcttacgggtcatgaaggtagaa
gacaaagagggaccctccagttctaagctgatcaccaagaaggcaccccaaccagccaaa
cctacgttagctgagcagatgctcacacgagaaaagaaggttctggaagcaagcatgggg
aaggccatctcgctgtctagggaagagtccactgcagaccagattaagtcagagacagct
gtggtggcagtcactcaggaccagtcctcagaggcagccatggggggagccacaccggcc
cagaccatctccaaggcagccattgggggagccatgctgggccagaccacctcagaggag
gctgtcgggggagccactccggaccacaccacctcagaggaaactgtgggaggagccact
ctggaccagaccacctcagaggatgctgttaggggagccactctggcccagactacctca
gaggctgtaggaggagctacactggcccagaccacctcagaggcagccatggagggagcc
acactggaccagactacgtcagaggaagctctagggggcaccgagctgatccaaactcct
ctaaccttgagcacagaccaccagaggcccccaacgtcacctgtgcagggaactacaccc
cagatacctcccagtacactgattgggagtctcaggaccttggagctaggcagcgaatct
cagggggccctagaatctcaagccccaggagaggagaacctactaggagaggcagctgga
ggtcaggacatggctgattcgatgctgatgcagggatctaagggcctcactgatcaggcc
atattttatgctgtgacaccactgccctggtgtccccatttggtggcagtatgccccata
cctgcagcaggcctggacgtgacccaaccttgtggggactgtggaacaatccaagagaat
tgggtgtgtctctcttgctatcaggtctactgtggtcgttacatcaatgcccacatgctc
cgacaccatggaaactctggacacccactggtcctcagctacgtcgacctgtcgacctgg
tgttactactgtcaggcctatgtccaccaccaggccctcctagatgtgaagaacatcgcc
caccagaacaagtttggggaggatatgccccacccatactaa

DBGET integrated database retrieval system