Shewanella baltica OS117: Sbal117_0682
Help
Entry
Sbal117_0682 CDS
T02013
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sbs
Shewanella baltica OS117
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbs03016
]
Sbal117_0682
Enzymes [BR:
sbs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Sbal117_0682
Transfer RNA biogenesis [BR:
sbs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Sbal117_0682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AEH12472
UniProt:
A0A7U3Z8A1
LinkDB
All DBs
Position
complement(762918..763463)
Genome browser
AA seq
181 aa
AA seq
DB search
MQQRLFLGFAPTAAQRARLSDVQQQLFCHLNPEAKAVSVTNMHLTLCFLGQVDDEQRIAL
LDAIDRLAKPRFSVQLNLLDLWPNAKVCCLKGDEVEPPLAQLAKQTQAIAGRLQLHSSEH
HFCPHISLFRKAKQWTLDEAALLQLKDMNTLTLTPECLHLYHSKSTSTGVEYHILHSWTL
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaaggctatttctcggcttcgcgcctaccgcagcacaaagggcaaggctgagt
gatgtacagcagcaactgttctgccacctcaatcctgaggcgaaagcggttagcgtcact
aatatgcatttaacgctctgctttttagggcaagtggacgacgagcaacgcatcgccctt
cttgatgcgattgaccgcttagctaagcctagattcagcgttcagcttaacctgctcgac
ttatggcccaatgccaaagtctgttgcttgaaaggcgatgaagttgagccgccgttagcg
caattagctaagcagacgcaagcaatcgcaggccgcctgcaattgcatagcagtgaacac
cacttttgcccgcacatcagtttattcaggaaggcaaaacaatggacgctagatgaagcg
gcgttattgcaactcaaggacatgaatacgctaacgttaacgcccgaatgtttgcattta
tatcattcaaaaagcacaagcacgggtgtggaatatcacatcctacattcttggacgctc
ggttag
DBGET
integrated database retrieval system
