Shewanella baltica OS117: Sbal117_2251
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Entry
Sbal117_2251 CDS
T02013
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sbs
Shewanella baltica OS117
Pathway
sbs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sbal117_2251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbs03400
]
Sbal117_2251
Enzymes [BR:
sbs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sbal117_2251
DNA repair and recombination proteins [BR:
sbs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sbal117_2251
RecFOR pathway proteins
Sbal117_2251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
AAA_3
nSTAND3
AAA_22
AAA_14
Mg_chelatase
Bac_DnaA
RNA_helicase
NB-ARC
AAA_18
Rad17
AAA_17
AAA_24
NTPase_1
DUF815
TsaE
AAA_25
AAA_19
DEAD
AAA_11
NACHT
IstB_IS21
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AEH13976
UniProt:
A0A7U3ZB46
LinkDB
All DBs
Position
2579347..2580351
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIQPQIQAQDESIDRAMRPKMLDEYTGQDHTRAQLKVFIQAAKNRNEALDHMLI
YGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLESGDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLR
LEFYNIKDLSTIVTRSAQVMELDIDAEGAFEIARRSRGTPRIANRLLRRVRDYAQVKHDG
AVTKFVAEHALDLLDVDSEGFDYMDRKLLLAIIDKFIGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRIATARAYQHFELIKPE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggcagacagactcatccagccgcagatccaagctcaagatgaatccatcgac
agggcgatgcgccctaaaatgctcgatgaatacacgggccaagatcacacgcgggctcag
cttaaggtgtttattcaagcggcgaagaatcgtaacgaagccttagaccatatgttgatc
tacggtccgccaggattgggtaaaaccaccttggctatgattgtggcgaacgagatgggg
gtaaacattaaatctacctcgggtcccgtgcttgaaaaagccggtgatctcgcagctctc
ctgaccaatcttgaatccggtgatgtgttattcatcgatgaaatccaccgattaagccct
gtggtggaagagattttgtatccggctatggaagattatcagctggatatcatgataggt
gaaggacctgcggcacgttctatcaagcttgatttaccgccgttcactctagtgggcgcg
acaacacgggcaggggcgttaacctcaccacttcgggcgcgttttgggatcccgctgcgg
cttgagttctataacatcaaagatttaagcaccatagtcacgcgttcggcgcaggttatg
gagctggatattgatgccgaaggcgcatttgaaattgcgcgccgttcacgcggcacaccg
cgaatagccaaccgattgctgcgccgcgtgcgggattacgcgcaggtgaagcatgacggc
gcagtcactaagtttgtggccgaacacgctttagacttgctagatgtggatagtgaaggt
ttcgattatatggatcgcaaattgttactggctattatcgataaatttatcggtggacca
gtaggactagacaacttagccgcagccataggcgaagaacgtgaaaccatcgaagatgtg
ttagaacctttcttgatccaacaagggtttatccaacgcacgccccgcggccgaattgca
accgcacgggcatatcagcattttgagttgatcaaacccgaatag
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