Shewanella baltica OS678: Sbal678_3930
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Entry
Sbal678_3930 CDS
T01725
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sbt
Shewanella baltica OS678
Brite
KEGG Orthology (KO) [BR:
sbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbt03019
]
Sbal678_3930
03009 Ribosome biogenesis [BR:
sbt03009
]
Sbal678_3930
Messenger RNA biogenesis [BR:
sbt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sbal678_3930
Ribosome biogenesis [BR:
sbt03009
]
Eukaryotic type
Pre-60S particles
RNases
Sbal678_3930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ADT96060
LinkDB
All DBs
Position
complement(4544106..4544651)
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AA seq
181 aa
AA seq
DB search
MTADVNNLIWIDLEMTGLEPDVDRIIEIATLVTDQELNIIGQGPVIAIHQSDDVLAAMDD
WNQKHHGESGLIDRVRASQETEAQAVAKTIAFLEQYVPKGASPMCGNSIGQDRRFLNRYM
RELEDYFHYRNVDVSTIKELVKRWSPETMAGFKKQNTHQALQDIQESIAELQYYRSKVFK
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagatgtaaataatctcatttggatcgatttggaaatgacagggttagagccc
gacgtcgacaggatcattgaaattgccactttagtgacagatcaagaactcaatattatc
ggtcaaggtccggttatcgcgattcatcaatcggatgacgtgctggccgctatggatgat
tggaatcaaaagcaccatggtgagtcagggttgattgaccgcgttcgtgctagccaagaa
accgaagcgcaagccgtggctaagacgattgccttcttagaacagtatgttcctaagggc
gcttctccaatgtgtggtaacagtattggccaagatagacgcttcttaaatcgttatatg
cgcgagctggaagattatttccactaccgcaatgtggatgtcagtacgattaaagagcta
gtgaagcgttggagcccagaaactatggcgggctttaagaagcaaaacactcaccaagca
ctgcaggatatccaagagtcgatcgctgaattgcagtattatcgcagcaaagtatttaaa
atttga
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