Sphaerochaeta globosa: SpiBuddy_0003
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Entry
SpiBuddy_0003 CDS
T01439
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
sbu
Sphaerochaeta globosa
Pathway
sbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SpiBuddy_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbu03400
]
SpiBuddy_0003
DNA repair and recombination proteins [BR:
sbu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SpiBuddy_0003
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_29
ATPase_2
AAA_27
ABC_tran
AAA_16
AAA_5
AAA
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADY11849
UniProt:
F0RWZ9
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All DBs
Position
2834..3916
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AA seq
360 aa
AA seq
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MRFIELWTNQFRNLVSQRIPVDNRQVFLIGPNGQGKTNLLEALYALCYGSSFRTNQLKEL
TVHGEKAFKIVGIYLGDDQIRHTLMLEWKDGKRSMSLDDREVKDRKELIYNIPCIVFSHD
DIFFIKGEPEQRRRFFDQTMSMYNPLFFDDLRRYRLVLRQRNQAIKDGRFELLDLYDLQL
AKYGLAIQSERTRAVYEFDQIFPSMYKDVSQNTMEVHIEYHPSWNDCATEEEIVEYLART
RSRDISMLTTTSGIHRDRFLVMEAGQPFSQTGSTGQLRLASLIFRTAQMAFFQKKTGKEP
LILVDDVLLELDFEKREHFLHLMQTYCQAFFTFLPEEHYFSELAEEGALLYTVQEGRFLN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcatcgagctttggactaatcagtttaggaatctcgtcagccaaaggatacct
gtcgataatcggcaggtattcctcattggaccaaatggacagggaaaaaccaatttgctt
gaagccctctatgccctttgttatggttcttcgtttcggacgaaccaactcaaggaactg
acggtccatggagaaaaagctttcaagattgtaggcatttaccttggtgacgaccaaatc
cggcacaccctgatgttggaatggaaagacggcaagcgcagcatgtcactcgatgatcgt
gaagtgaaggaccgcaaggaattaatctataacattccctgcatagtattcagtcatgac
gatatatttttcatcaagggtgaaccggagcagcgacgaagattcttcgatcagacgatg
agcatgtacaatccacttttttttgacgacctgcgtcgttatcgacttgttcttcgtcag
cgaaaccaagctatcaaggatggtcgatttgagctcttggatctctatgacttgcagctt
gccaagtatgggcttgcgatccagagtgaacggactcgggcagtctatgaatttgaccag
atttttccttcgatgtacaaagatgtctcccaaaacaccatggaggtgcatattgagtac
cacccctcatggaatgattgtgctaccgaagaagagattgttgagtatttggctcgtacc
agaagccgtgatataagtatgcttaccactaccagcggtatccatcgggatagatttctg
gttatggaagctggccagccgttttcccagaccggctccaccgggcaactacggcttgct
tcattgattttcagaactgcacagatggcattctttcagaaaaagactggtaaggagcct
ttgattcttgtcgatgatgtgttacttgagttggattttgaaaagcgtgagcatttcctg
cacttgatgcaaacctactgccaagcctttttcacctttctacccgaagagcattatttt
tcagagctggccgaggaaggagctttgctctatactgtccaggaaggaaggtttttgaac
tga
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