Sphaerochaeta globosa: SpiBuddy_1280
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Entry
SpiBuddy_1280 CDS
T01439
Name
(GenBank) hypothetical protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sbu
Sphaerochaeta globosa
Pathway
sbu03030
DNA replication
sbu03430
Mismatch repair
sbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SpiBuddy_1280
03430 Mismatch repair
SpiBuddy_1280
03440 Homologous recombination
SpiBuddy_1280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbu03032
]
SpiBuddy_1280
03400 DNA repair and recombination proteins [BR:
sbu03400
]
SpiBuddy_1280
Enzymes [BR:
sbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SpiBuddy_1280
DNA replication proteins [BR:
sbu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SpiBuddy_1280
DNA repair and recombination proteins [BR:
sbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SpiBuddy_1280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
GNAT_acetyltran
Motif
Other DBs
NCBI-ProteinID:
ADY13105
UniProt:
F0RYW9
LinkDB
All DBs
Position
1386167..1387348
Genome browser
AA seq
393 aa
AA seq
DB search
MFEKLEPFQRALAEQMRTQIEGGTFSQVNLFGGPRYSLRMSFALEAARILSCNDQGLEGC
TCGSCRKFATLSASNVLVVSQRDHKSMIETNLSAFMRQCNEFSKIQVIRSIRILLLQYNS
FFTPANPTQNTAFDAAAAVNELLISLSQEKDLGPKEAKKWADDLRSALKSLYAASRKNTT
ITIGQVRAVDEWVNQTSMGSSKRFIILEAMEQTNVSARNSLLKILEEPPEDTYFFLISEF
PNRIMSTILSRVRRYAFPPLGKEAVGRYLEPYYLHDKEYESLEQFYLEGGGMDLQKNRQI
ASMIFSSVQSNRYISLGDLQQLLSNVDDMDSYEYVLRSFLDQLSLELEEGNLATDLAYKL
SNLVSSSFSEGQLYNQNGRLMLESLYYRLMEAR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaagcttgaaccctttcagcgcgccttggcggaacagatgcgcacgcagatt
gaaggcggtacattcagtcaggtgaatttgttcggaggaccacgctacagtctcagaatg
agctttgccttggaggcagcccgcattctctcctgcaacgatcagggcctggaaggttgt
acgtgtggaagttgccgtaaatttgcaaccctttctgcttcaaatgtcttggtggtaagc
cagcgggatcacaaaagcatgatcgagaccaacctgtccgccttcatgcgtcaatgcaac
gagttttcaaaaatccaggtaattcggagcattcgcatcctactacttcagtataatagc
tttttcactccggcaaaccctacccagaatactgctttcgatgcagccgctgcagtcaat
gagttgctcatttccctcagccaagaaaaggatctgggacccaaggaagcaaaaaaatgg
gctgacgaccttcgttctgccctcaagagtctgtatgcggccagccgcaagaataccacg
atcaccatcggtcaggtacgggcggtggatgaatgggtaaaccaaaccagcatgggctca
agcaagcgattcattattcttgaagcgatggaacagaccaatgtctctgcgcgcaatagt
ctgcttaagattttggaagaaccgccggaggatacttatttctttcttatcagcgaattt
cccaaccgtattatgagtaccatcctttctcgggtgagaaggtatgcattccctccgttg
ggaaaagaagcggttggccgctatctagagccgtattacctccatgacaaggaatatgag
agcttggaacagttctaccttgaaggcgggggtatggacctccaaaagaatcgccagatc
gccagcatgattttttcatcagtacagagcaaccggtatataagccttggcgatttacag
cagttactctccaatgttgatgacatggacagttatgagtacgtgttgcgatcgtttttg
gaccagctctcgcttgaactggaagagggaaaccttgccacagatttggcctacaagctc
tccaatctggtgagcagcagtttttcggaggggcagttgtacaatcagaacgggcgtctg
atgttggagtccttgtactaccgtttgatggaggcgcgatga
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