Sphaerochaeta globosa: SpiBuddy_3026
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Entry
SpiBuddy_3026 CDS
T01439
Name
(GenBank) Polygalacturonase
Organism
sbu
Sphaerochaeta globosa
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pectate_lyase_3
Motif
Other DBs
NCBI-ProteinID:
ADY14832
UniProt:
F0RZT1
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Position
complement(3277920..3279281)
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AA seq
453 aa
AA seq
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MREYTLKSFGAVGNGQQNESEAFAKALAALSDGGVLHIEEGTYLTGPLHIQAKGLVLELD
RGAVIQFIADENLYTPVYSRWEGVNCYCMHPCLLIENSDGLIVRGEGIIDGNGQWWWDTA
HKKRTTQKGPVSAMENELSRLNPGYERQSGGGGGRQSQFLRPPLVQILNSNNVKLEGLTL
QNSPFWTLHPLYSTNLIFMDLKVLNPKDAPNTDGIDVDSCRFVTIKKCLVDVGDDGIALK
SGSGPDGVATNKPTTDILIEECTVKSAHGGAVIGSETAAGIRDVRVHDCLFDGTDRGIRI
KTRRGRGGAISNLHFSSVRMKNNLCPLTLNMYYRCGSLDPQDFSLEKLSITDTTPSIEGV
TIEDCYSEDFTSSAAFIVGLPESPIRDLVIRNCTFTVAKTGLTPVDESEMYEGLPEPQGR
GIRLRNVQLSIQDVQVEGVESALVVEDGVELHS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagtacacgttgaaaagctttggggccgttggtaatggccaacagaatgagagt
gaagcgtttgccaaggcacttgccgctctatctgatggtggggtgctccatatcgaggaa
gggacttatttgacagggccgttgcacatacaggccaagggcttggtcctcgagctggat
agaggtgcggtcattcagttcattgcagatgaaaacctctataccccggtttattcccgc
tgggaaggcgtgaattgttattgcatgcatccttgcctgctcatcgagaattctgatggt
ctcatcgtgcgtggtgagggaatcatcgatggaaacggacagtggtggtgggatactgcc
cacaaaaaacgtactacccagaaggggcctgtatcggcgatggaaaacgaactttcccgc
ctcaatccaggctatgagcgtcagagcggtggtggtgggggaaggcagagtcaattcctg
cgtcctcctttggtgcagattctgaacagcaacaatgtaaaactggaaggtctaaccttg
cagaacagcccattctggacactgcatccgttgtacagtaccaatttgatattcatggat
ttgaaggtactcaatcccaaggatgctcccaataccgatggaatcgatgtggattcctgc
cggtttgtcaccatcaaaaagtgcttggtggatgtcggtgacgatggaattgccctgaag
agcggcagtgggcccgatggagttgccaccaacaagccgacaaccgacattcttattgaa
gagtgtaccgtcaagagtgcccatggaggggcggtcataggcagtgaaacggctgcaggt
attcgagatgtacgggtacatgattgtctctttgacgggactgaccggggaattcggatc
aagacacgaagaggccgtggtggggcaatttccaaccttcacttttcttcagtgcgaatg
aaaaacaacctctgtcctctcacgctgaacatgtattaccgttgcggcagcctcgatccc
caggatttttccttggagaagttgagcataacagataccactcccagtatcgagggagtg
accattgaggattgctacagtgaggatttcacttcctccgctgccttcatcgtaggcctt
cccgagtctcccatcagggatctggtaatccgcaactgtacctttacggtagccaagaca
gggcttactccggttgatgagagtgagatgtatgaaggcctgcccgaaccccaagggagg
ggaatcagactgaggaacgtacagttgtccattcaggatgtacaggtagagggcgtagag
tccgccttggttgttgaggatggggtggagctgcatagctag
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