Serinus canaria (common canary): 103821817
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Entry
103821817 CDS
T05755
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
scan
Serinus canaria (common canary)
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scan04040
]
103821817 (SCN4A)
Ion channels [BR:
scan04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103821817 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
103821817
NCBI-ProteinID:
XP_018776947
LinkDB
All DBs
Position
Unknown
AA seq
1829 aa
AA seq
DB search
MRRPPAPFPFAAGWTDEVLFAAGWARRAREQNESMAGLPHIPGPENLRPFTPASLAAIEQ
RRAEAEALRIRRQQVEMPEEEEVKPSSDLEAGKNLPLIYGDPPLELIGTPLEDLDPFYKD
KKTFIVLNKGKSIFRFSATPALYMLGPFNPIRRGAIKVLIHSLFSMFIMITILTNCVFMT
MSNPPAWSKNVEYAFTGIYTFESLIKILSRGFCIDDFTFLRDPWNWLDFMVISMAYITEF
VDLGNISALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGL
QLFMGNLRQKCVRWPPPNSTFLQDLGLDNDTSANSTFDDFMDDFTGNFTGNFTGNFTGNF
TESSSFDFEAYISDEANYYFLEGALDALLCGNSSDAGKCPEGYECMKAGRNPNYGYTSYD
TFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAY
AEQNDATMLEEQQKEEEFQQLMEQLKKQQEEQERLLQERSSSSNSLPSSVAGKGHDSDLN
SDQDKAKDCNGQVVPKITLQRSDTVVDFNHEPEKPDLNHLTVGNQDGPGLEKRVGSAISV
ISNAVEELEEAHQKCPPWWYKFAHTFLVWNCCRPWVKLKEFVKLVVMDPFVDLGITICIV
LNTLFMAMEHYPMTEEFENVLSVGNLVFTGIFTAEMVLKLIALDPYEYFQQGWNIFDSFI
VTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAI
IVFIFAVVGMQLFGKSYIECVCKISVDCTLPRWHMNDFFHSFLIVFRILCGEWIETMWDC
MEVAGQTMCLIVFMMVMVIGNLVVSLGLGDTGGAAWGLLSSSAFPQGCARGRVWMECRDS
PPSPGPSGGLYQLCVRQRGERFLRDPSASVPIPEVPLSPPQRCHCSHPRGATVPSPENPL
CSDNASSVCSTVDYKPPAPEEEEVAEEAEESNEPEECFTEGCVKRFPCLYVDITSEKGKI
WWNLRKTCFLIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILEYADKVFSYIF
VIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCVNTTTGE
LFDIDVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDS
REIEEQPQYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPANKVQGKVFDFVTKQVFDITIMILICLNMVTMMVETDD
QSELKTSVLYKINLVFIVIFTGECVLKMFALRHYFFTVGWNIFDFVVVILSILGIVLSDI
IEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIY
SIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLLNPILNSGPPDCDPE
LENPGSSVKGDCGNPAIGIFFFCSYIIISFLIVVNMYIAIILENFSVATEESSEPLCEDD
FEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLRVPKPNKIKLITMDLPMVAGDKIHC
LDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLKRKHEEVCATRIQR
AFRRYLLRRSVKQASYMYRHSQDALGEDAPEKEGLIATKMQEIYGNSGTDVETAPALGLK
PIPSSETPQDAPEEAQAWDKEHVVKESLV
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atgaggagacccccagcaccgtttccgtttgcagcaggttggactgacgaggttctgttt
gcagcaggctgggcgcggcgggcccgggagcagaatgagagcatggccggcctgccgcac
atcccgggccccgagaacctgcgccccttcacgccggcctcgctggccgccatcgagcag
cgcagggccgaggccgaggcgctccgcataaggaggcagcaggtggagatgcctgaggaa
gaggaggtcaagcccagcagtgacctggaagccggcaagaacttgcccctcatctatggt
gacccacccctggagctcatcgggacccccctggaggacctggaccctttctacaaggac
aagaagacgttcatagtcctcaacaagggcaagtccatcttccgcttctcggccacccct
gccctctacatgctggggcccttcaaccccatccgcagaggagccatcaaagtcctcatc
cattcattattcagcatgttcatcatgatcaccattttaaccaactgtgtgtttatgaca
atgagcaaccccccggcgtggtccaagaacgtggaatacgccttcactgggatctacacc
ttcgagtctctcatcaagatcctgtccagaggcttctgcatcgacgacttcacattcctg
cgtgacccgtggaactggctggacttcatggtcatctccatggcctacattaccgagttc
gtggacctggggaacatctctgctctcaggaccttccgtgtcctccgtgccttgaaaacc
atcacagtgataccagggctcaagacgatcgtgggggctctgatccagtcggtgaagaag
ctctcggacgtgatgatcctcacggttttctgcctgagcgtcttcgccctcattggcctc
cagctcttcatgggcaacctccggcagaagtgtgtgcgctggcctccccccaacagcacc
tttctgcaggatctggggctggacaacgacacctcggccaactccaccttcgacgacttc
atggatgacttcaccgggaacttcaccgggaacttcaccgggaacttcaccgggaacttc
accgagagcagcagctttgactttgaggcctacatcagtgatgaagccaattactacttc
ctggagggagccctggatgccctgctctgcgggaacagcagcgacgctgggaagtgcccc
gagggctatgagtgcatgaaggccgggaggaaccccaactatggctacaccagctacgac
accttcagctgggccttcctggccctcttccgcctcatgacccaggacttctgggagaac
ctcttccagctgacactgcgggcagcagggaaaacctacatgatcttcttcgtggtggtg
atcttcctgggctccttctacctcatcaacctcatcctggccgtggtggccatggcttac
gccgagcagaacgatgccaccatgctggaggagcagcagaaggaggaggaattccagcag
ctcatggagcagctgaagaagcagcaagaggagcaggagagattgttgcaggagcgctca
tccagcagcaattccctgcccagcagcgtggccgggaaggggcacgactcggacctcaac
agtgaccaggacaaggccaaggactgcaacgggcaggtggtgcccaagattaccctgcag
agatccgacaccgtggttgatttcaaccatgagccagagaagccagacctcaaccacctc
actgtgggcaaccaggatgggccagggctggagaagagggtgggaagtgccatcagtgtc
atctccaatgctgtggaagagctggaagaagctcaccagaaatgcccaccctggtggtac
aaattcgcccacacattcctggtctggaattgctgccgtccctgggtgaagctgaaggag
tttgtcaagctggtggtgatggaccccttcgtggacctgggcatcaccatctgcatcgtg
ctcaacactctcttcatggccatggagcactaccccatgacggaggagttcgagaacgtg
ctgagcgtggggaacctggtcttcacagggatcttcacggcagagatggtcctgaagctc
attgctctggatccctacgagtatttccagcagggctggaacatctttgacagcttcatc
gtcaccctgagcctggtggagctgggcctggccaacgtgcaggggctctccgtgctgcgc
tccttccgcctgctgagggttttcaagctggccaagtcctggcccactctcaacatgctc
atcaagatcatcggcaactccgtgggtgccctgggcaacctgacgctggttctggccatc
atcgtcttcatctttgccgtggtggggatgcagctcttcggcaagagctacatcgagtgc
gtgtgcaagatctctgtggactgcaccctgccccgctggcacatgaacgacttcttccac
tccttcctcatcgtcttccgcatcctctgcggggagtggatcgagaccatgtgggactgc
atggaggtggccggccagaccatgtgcctcatcgtcttcatgatggtcatggtcatcggc
aacctcgtggtgagcctggggctgggggacacagggggtgctgcgtggggactcctgtcc
agctcagcttttccacagggctgtgcccgtggcagggtctggatggagtgcagggattct
cctccctccccaggcccttcgggtgggctgtatcagctctgtgtgagacagaggggggaa
cggttcctgagggaccccagtgccagcgtccccatccccgaggtgccactgtcgcctccc
cagaggtgccactgttcccatccccgaggtgccactgtcccctccccagagaaccccctg
tgcagtgacaacgcctcgtccgtgtgcagcacggtggattacaaaccccccgcgcccgag
gaggaggaggtggcagaagaggctgaggagagcaacgagcccgaggagtgtttcactgaa
ggctgtgtgaaaaggttcccctgcctctacgtggacatcaccagtgagaaggggaagatc
tggtggaacctcaggaaaacctgcttcctcattgtggagcatgactggtttgagaccttc
atcgtcttcatgatcctcctcagcagtggggcactggctttcgaggacatctacatcgag
cagcgcaaggtgatccgcaccatcctggaatatgcagacaaggtcttctcctacatcttt
gtcatcgagatgctgctcaagtgggtggcctatggcttcaaggtgtatttcaccaatgcc
tggtgctggctggatttcctcatcgtggatgtgtccctggtcagcctgacagcaaactgg
ctgggatactccgagctgggagccatcaaatccctgcggaccctgagggctctgcgaccc
ctgcgtgctctgtcccgcttcgagggcatgagggtggtggtgaatgccctggtgggtgcc
atcccctccatcatgaacgtcctgctggtctgcctcatcttctggctgatcttcagcatc
atgggggtgaacctgtttgcagggaagtactacaggtgtgtcaacaccaccacgggggag
ctcttcgacatcgatgtggtcaacaacaagagcgactgcatggccctgctccacaccaac
gaggtcagatgggtcaatgtcaaggtcaacttcgacaacgtgggcttgggatacctgtcc
ctgctgcaggtggcaaccttcaaaggctggatggacataatgtatgcagctgtggactcc
cgtgagattgaagagcagccacagtacgagatcaacctttacatgtacatctacttcgtc
atcttcatcatctttggtgccttcttcaccctgaacctcttcatcggcgtcatcatcgac
aacttcaaccaacagaagaaaaagtttggaggcaaagacatcttcatgacagaagagcag
aagaaatactacaatgccatgaagaagctgggctccaagaaaccccagaagcccatcccc
aggccagcgaacaaagtccaagggaaggtgtttgacttcgttaccaagcaagtgtttgac
atcaccatcatgatcctgatttgcctgaatatggtgaccatgatggtggaaacagatgac
cagagtgagctcaaaacctctgtcctctacaagataaacttggtcttcatcgtcatcttc
accggcgagtgcgtgctcaagatgttcgccctgcgccactacttcttcactgtgggctgg
aacatctttgacttcgtggtggttatcctctccatcctaggtatcgtcctctcagacatc
atcgagaagtactttgtgtcccccaccctcttcagggtgatccggctggcgaggatcggc
cgcgtgctgcggctgatccgaggagccaaaggcatccggacgctcctctttgccctgatg
atgtccctgcccgccctgttcaacatcggcctcctgctcttcctcgtcatgttcatctac
tccatcttcggcatgtccaacttcgcctacgtcaagaaggagtcgggcatcgatgacatc
ttcaacttcgaaacctttgggaacagcatcatctgcctgttccagatcaccacgtcagcg
gggtgggatgggctcctcaaccctatcctcaacagcggccccccggactgtgaccccgag
ctggagaaccccgggagttcggtaaaaggagactgtggcaaccctgccatcggcatcttc
ttcttctgcagctacatcatcatctccttcctcatcgtggtgaacatgtacatcgccatc
atcctggagaacttcagcgtggccacggaagagagcagcgagcctctctgtgaagacgat
tttgaaatgttttatgaaacttgggagaagttcgacccagacgccacccagttcattgcc
tacagcaccttgtctgactttgtggacaccttgcaggagccactcagagttcccaagccc
aacaagatcaaactcatcaccatggatctaccaatggttgctggggacaaaatccactgc
ctagacatcctctttgccctgactaaggaagtgctgggagactcgggagagatggatgcc
ctgaaggccaccatggaggagaagttcatggctgccaacccctcgaaggtttcctatgaa
cccatcaccaccaccctgaagaggaaacacgaggaggtgtgtgctaccaggatccagagg
gcgttccggaggtacctcctgcggcgctcggtgaagcaggcgtcctacatgtacaggcac
agccaggacgcgctgggggaggacgcgcccgagaaggaagggctgatcgccactaaaatg
caggagatctatggcaactctgggacagatgtggagacagcccctgccctgggcctcaag
cccattcccagctcagagacgccccaggatgctcctgaggaagcacaggcttgggataag
gaacacgtggtgaaagagtcactggtgtaa
DBGET
integrated database retrieval system
