Serinus canaria (common canary): 103825040
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Entry
103825040 CDS
T05755
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X2
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
scan
Serinus canaria (common canary)
Pathway
scan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103825040 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scan03019
]
103825040 (PAN2)
Enzymes [BR:
scan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103825040 (PAN2)
Messenger RNA biogenesis [BR:
scan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103825040 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
103825040 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAN2_N
UCH_1
UCH
WD40_like
TMCCDC2
Motif
Other DBs
NCBI-GeneID:
103825040
NCBI-ProteinID:
XP_009098588
UniProt:
A0A8C9MW98
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MNFEGLNPSLAEFAPPLHPALEPVLDPHLNPNLVELDPEGVALEGLPVPDPVPLMEGIYS
ELHTAVSEVGVPVAVAHFDLHEEMLWVGNHGGHATSFFGPTLERYSSFQVNSSDDIRQIQ
SLENGVLFLTKTNLKYLSRGGLIIFDYLMDESEDMHSLLLTDNNTLLVAGLQNHVLEMDL
NTVQETQKYTVEVPGITIMRQSNRFFFCGHTSGKVSLRDLRTFVVEHEFDAHSGSLSDFD
VHGNLLVTCGFSSRMNGLACDRFLKVYDLRMMRATTPLQVHIDPFFLRFIPTYTSRLAII
SQTGQCQFCEPTGLANPADIFHVNTVGPLIMTFDVSASKQALAFGDSEGCVHLWADSPEV
TFNAYSRETDFALPCMVDTLPHLDWNQDLVPLSLIPVPLTSDALLSDWPAANSAPAPRRA
PPVDPEILRTMKKVGFIGYAPNPRTKLRNQIPYRLKEMDNDFDNFSQVPESPIGREEEPH
LYRVAKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRC
LVQNHLCQKEFCLGCELGLLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADSDEA
TGKVNLGRLIQSWNRFILTQLHQETQEQEGPQAYRGAGSSFGSSGDSVIGQLFSCEMENC
SMCRCGKETVRVSSTLLFTLSYPDSTEKPAKDYEFAQILKRSICLEQNTQAWCENCEKYQ
PTVQTRNIRCLPDVLVINCEVNSSKEADFWKTQAEYSFQKAMMKRGGFDITKGKEISLGD
WKDLGNPDVGHSYPSVEELKNIWIPHAIKMRLTKSKELDVSNWCETDELSPTDDPESVYV
YDLMATVVHILDSRTGGSLVGHIKVGETYHQRKEGVTHQQWYLFNDFLIEPVDKCEAVQF
DMSWKVPAILYYARRNLNSKYNLVIKNPIEASVLLAEASLARKQRKCHATFIPLMLNEMP
QAGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGVPFIDDYI
STQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDMGVKFVGHGLQKDFR
VINLMVTA
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgaggggctcaacccctccctggccgagttcgctcctcccctgcaccccgcg
ctggagccggtgctggacccgcacctgaaccccaacctggtggagctggaccccgagggg
gtggccctggaggggctcccggtgcccgacccggtgcccctgatggagggcatctacagc
gagctgcacacggccgtctccgaggtcggcgtgcccgtggccgtggcacacttcgacctg
cacgaggagatgctgtgggtcggcaaccacgggggccatgccacctccttcttcgggccc
actctggagcgctactcgtccttccaggtgaacagcagcgacgacatccgccagatccag
agcctggagaacggcgtcctcttcctcaccaaaaccaacctcaagtacctgtcccgggga
ggcctcatcatcttcgactacctcatggatgaatccgaggacatgcacagcctcctgctg
acggacaacaacaccctgctggtggccgggctgcagaaccacgtgctggagatggacctc
aacaccgtgcaggagacacagaagtacaccgtggaggtgcccggcatcaccatcatgagg
caatccaaccgcttcttcttctgcggccacacctcaggcaaggtgtccctgcgtgacctg
cgcaccttcgtggtggagcacgagtttgacgcccactccgggagcctgtcggattttgac
gttcacgggaacctgctggtgacctgtggcttctccagccgcatgaatggcctggcctgt
gaccgcttcctcaaggtctatgacctccgaatgatgagggccaccacccccctgcaggtc
cacatcgaccccttcttcctccgcttcatccccacctacacctcccgcctggccatcatc
tcccagacaggccagtgccagttctgtgagcccaccgggctggccaaccccgctgacatc
ttccacgtcaacaccgtggggccgctcatcatgaccttcgacgtgtctgccagcaagcag
gcgctggccttcggcgactccgagggctgtgtccatctctgggccgactccccagaggtc
actttcaacgcctactcccgtgagactgactttgccctgccctgcatggtggacacgctg
ccacacctggactggaaccaggacctggtgcctctgtcgttgatcccggtgccgctgacc
agcgacgcgctgctctccgactggccggccgccaactcggccccggcaccaaggcgagcc
cccccggtggatcccgagatcctgcgcaccatgaagaaggtggggttcatcggctacgcc
ccaaaccccaggaccaagctccgtaaccagattccttatcggctaaaggagatggacaac
gactttgacaacttcagccaagtccccgagtccccgatcgggcgtgaggaggagccacat
ctctacagggtggccaagaagtacaggaaggtcaccatcaaatactccaagctggggctg
gaggattttgacttcaagcattacaacaagacgctgtttgcagggctggagccccacatt
cccaacgcctactgcaactgcatgatccaggtgctgtatttcctggagccagttcgctgc
ctggtccagaaccacctgtgccagaaggaattctgcctgggctgcgagctgggcttgctc
ttccacatgctggacctgtcccgaggagacccctgccagggaagcaattttctgcgggct
ttccgcacgatcccggaggcgtcggctctgggcttgatcctggcagactcagatgaagcc
acggggaaggtgaacctggggaggctgattcagagctggaaccgtttcatcctgactcag
ctgcaccaggaaacccaggagcaggagggaccccaggcctaccggggggctggcagcagc
tttggctcctcgggggactctgtgatcgggcagctgttcagttgtgagatggagaactgc
agcatgtgccgctgtgggaaggagactgtccgtgtgtcctccacgctgctcttcaccctc
tcctaccccgacagcaccgaaaaaccagccaaggattacgagttcgcccaaattttgaag
cgtagcatctgcttggagcagaacacacaagcctggtgtgagaactgtgagaagtaccag
cccacggtgcagaccaggaacatccgctgcctgccagacgtgctggtcattaactgtgag
gtgaacagctccaaggaggcagatttctggaagacacaggctgagtattcctttcagaaa
gccatgatgaagagaggaggctttgacatcaccaagggaaaggagatctctcttggagac
tggaaggatctggggaaccccgacgtggggcattcgtatccttccgtggaggaactgaag
aacatttggatccctcacgccatcaagatgaggttgaccaagagcaaagagctcgacgtg
agcaactggtgcgagactgatgagctcagcccaacagacgaccccgagtccgtgtacgtc
tacgacctcatggccaccgttgtccacatcctggattcccgcactgggggcagcctggtg
gggcacatcaaggtgggagagacctaccaccaacggaaggagggagtcacacaccagcag
tggtacctcttcaacgacttcctcatcgagcccgtggacaagtgcgaggctgtgcagttt
gacatgagctggaaggttccagccatcctctactacgcccggaggaacctcaactccaag
tacaacctcgtcatcaagaaccccatcgaggccagcgtcctcctggctgaggcctcgctg
gcccgcaagcagcgcaagtgccacgccaccttcatccccctcatgctcaacgagatgccc
caagctggagacctggtggggctggacgccgagttcgtcacgctgaacgaggaggaggct
gagctgcgcagtgatggcaccaagtccaccatcaagcccagccagatgtcggtggcccgg
atcacctgcgtgcgtgggcagggtcccaacgagggggtccccttcattgatgactacatc
tccacccaggaacaggtggtggattacctgacccagtactctgggatcaagccaggagac
ctggacgccaagatctcctccaagcacctgaccaccctcaaatccacctacctgaagctg
cgtttcctcatcgacatgggcgtcaagttcgtgggccacgggctgcagaaggatttccgt
gtcatcaacctgatggtgacagcctga
DBGET
integrated database retrieval system
